| New model in OGS2.0 | DPOGS210915 |
|---|---|
| Genomic Position | scaffold3093:- 12904-13496 |
| See gene structure | |
| CDS Length | 510 |
| Paired RNAseq reads | 160 |
| Single RNAseq reads | 424 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003065 (7e-26) |
| Best Drosophila hit | Ecdysone-dependent gene 84A (4e-19) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein CPR59B [Papilio xuthus] (7e-35) |
| Best NR hit (blastx) | cuticular protein CPR59B [Papilio xuthus] (4e-27) |
| GeneOntology terms | GO:0008011 structural constituent of pupal chitin-based cuticle GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | ND |
Nucleotide sequence:
ATGGCATCCAAGTTCTTTGTACTTTTTTCTGCCCTCGTGGCTGCGGCGCAATGTTCAGTG
ATAAAAGTAGACAATGACGTCTCCAGCTTCTCATACGATGTCGCCGATCCCAACACCGGT
GACTACAAGAGTCAAGTTGAAACTCGCTCCGGTGGCGTTGTGAAGGGACAGTATTCTCTG
GTGGACCCCGATGGTACTAGACGCGTAGTAGACTACACAGCTGACGATGTGAACGGATTC
AACGCGGTTGTGCGTAAAGACCCACTGGTAGCTGCTGAACCTGTTATTGTACCTTCCGTC
GTTAATTCTCCAGCTGTCTACTCTTCTGTATCCCCTGCAGTTATCTCTCGTTCGTATGCT
GTACCATCGGTATACTCCGCTTCTTCACTATACCCAGTACAATCAGTATACCCTGGATCT
GTTTATCGTGTGTCATCAAGCTATGGCCGTGTTGCATCTCCCATTTACTCTCCCTATGGG
TATGGAGCTGTACAACTTAACCACTGGTAA
Protein sequence:
MASKFFVLFSALVAAAQCSVIKVDNDVSSFSYDVADPNTGDYKSQVETRSGGVVKGQYSL
VDPDGTRRVVDYTADDVNGFNAVVRKDPLVAAEPVIVPSVVNSPAVYSSVSPAVISRSYA
VPSVYSASSLYPVQSVYPGSVYRVSSSYGRVASPIYSPYGYGAVQLNHW