New model in OGS2.0 | DPOGS203747  |
---|---|
Genomic Position | scaffold1487:+ 25899-30485 |
See gene structure | |
CDS Length | 1173 |
Paired RNAseq reads   | 379 |
Single RNAseq reads   | 1607 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011493 (5e-125) |
Best Drosophila hit   | CG2976 (2e-63) |
Best Human hit | protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (1e-74) |
Best NR hit (blastp)   | PREDICTED: similar to Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferase alpha subunit) (GGTase-I-... iso [Canis familiaris] (2e-82) |
Best NR hit (blastx)   | PREDICTED: similar to predicted protein [Tribolium castaneum] (6e-78) |
GeneOntology terms    | GO:0016740 transferase activity GO:0005515 protein binding GO:0030548 acetylcholine receptor regulator activity GO:0018347 protein amino acid farnesylation GO:0045213 neurotransmitter receptor metabolic process GO:0004662 CAAX-protein geranylgeranyltransferase activity GO:0008017 microtubule binding GO:0004660 protein farnesyltransferase activity GO:0043014 alpha-tubulin binding GO:0090045 positive regulation of deacetylase activity GO:0005875 microtubule associated complex GO:0090044 positive regulation of tubulin deacetylation |
InterPro families    | IPR002088 Protein prenyltransferase, alpha subunit IPR008940 Protein prenyltransferase |
Orthology group | MCL12084 |
Nucleotide sequence:
ATGTCTGACAGTGGAGACAGTGATGTTTACTGGGTACCCTATAAGGAAAGACCGGAGTGG
AGCGATATAACTCCCGTTCCCGAAGATGATGGGATTACACCAGTAGTGGTCATTGCACAT
TCCGAAAAGTTCAAAGACGTCTATGATTACTTTAGGGCAGTACTGCAGAAGAATGAAAAA
TCAGAGCGAGCTTTACATCTCACAAAGGAGGCTGTGGAACTAAATCCAGCAAATTATACC
GTGTGGCAATATAGGAGAGATCTGCTCAAAGAATTAGCGACAGATCTGAGATCGGAGTTG
TATTATGTTGAATGTGTCATAAAACAGTCGCCAAAGAATTACCAGGTGTGGCATCACAGA
CGTGTGTTGGTCGAATGGCTTCAAGATCCGTCCCAAGAATTGGATTTGACGGGAGACACT
CTCATATCAGACCCTAAGAATTATCATGCATATAGGAGAGATCTTCTCAAAGAATTAGCG
ACAGATCTGAGATCGGAGTTGTATTATGTTGAATGTGTCATAAAACAGTCGCCAAAGAAT
TACCAGGTGTGGCATCACAGACGTGTGTTGGTCGAATGGCTTCAAGATCCGTCCCAAGAA
TTGGATTTGACGGGAGACACTCTCATATCAGACCCTAAGAATTATCATGCGTGGCAACAC
CGACAGTGGGCGATTAAAACTTTTGGACTATTTGATAAAGAGCTGGAGTTTGTGGACAAT
CTTATATCTGAAGATGTCCGCAACAACTCGGCTTGGAACCAACGCTACTTTGTTATGAAC
AATCATTTAGGCTGGTCTGATCTTAATGTGCAGAAAGAGATATGTTATACCTTGGAAAAA
ATCAGATTCATCAAAAACAATGAGAGCGCCTGGAATTATTTGAGAGGCGTCTTATTACAT
GATAAAAGAGGAGTGAGTGGTAATGCCGTGGTGCTCTCATTTTGTGAGGATTTATTTAAG
AACAGATGCCATTCACCGTATTTACTGGCATTCATTATTGATATCTGCGATGAAGTCATA
AAGAAAGGAGAGACAAGTATTACATATGGACCGGAACGGGCTCTAGAGCTTTGTAATGCA
TTGGCCGATAAATATGATAAAATCAGAACAAAGTATTGGAATTATATGGCAAATAAATTC
AAAGCACTCATAGATTTGAAAGCTACTTACTAA
Protein sequence:
MSDSGDSDVYWVPYKERPEWSDITPVPEDDGITPVVVIAHSEKFKDVYDYFRAVLQKNEK
SERALHLTKEAVELNPANYTVWQYRRDLLKELATDLRSELYYVECVIKQSPKNYQVWHHR
RVLVEWLQDPSQELDLTGDTLISDPKNYHAYRRDLLKELATDLRSELYYVECVIKQSPKN
YQVWHHRRVLVEWLQDPSQELDLTGDTLISDPKNYHAWQHRQWAIKTFGLFDKELEFVDN
LISEDVRNNSAWNQRYFVMNNHLGWSDLNVQKEICYTLEKIRFIKNNESAWNYLRGVLLH
DKRGVSGNAVVLSFCEDLFKNRCHSPYLLAFIIDICDEVIKKGETSITYGPERALELCNA
LADKYDKIRTKYWNYMANKFKALIDLKATY