| New model in OGS2.0 | DPOGS204648 |
|---|---|
| Genomic Position | scaffold1749:+ 5083-12976 |
| See gene structure | |
| CDS Length | 1767 |
| Paired RNAseq reads | 91 |
| Single RNAseq reads | 310 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001974 (6e-57) |
| Best Drosophila hit | ionotropic receptor 75d, isoform A (3e-39) |
| Best Human hit | glutamate receptor, ionotropic kainate 4 precursor (3e-09) |
| Best NR hit (blastp) | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (2e-78) |
| Best NR hit (blastx) | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (3e-74) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR012934 Zinc finger, AD-type IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL20851 |
Nucleotide sequence:
ATGGCTGACTCAAATACACGATACCATGCTATGATATACAAAGATGACTACCTGCCTCAG
AATCTTTGTATCGAATGCATGCAAAGATTAAAAAATTGCTATAAATTTAGAACGCAGACG
TTACAGGCGCAGACTATTATTGTGGATCTCATTAGAATAGGCAATTTCACAACAGAAGCT
ATAAAATCATTAAACCACAATCCCAAATGTAAACTGCAAATGCAGAGGTTTGATGCGAAC
CACTGCGATGCATACATTAACAAAGAGGACGTGAACCCCATACAAGAGATCGTTATAGAG
GAACAGGTTAAAATTGAAAAGGAATTTATTAACGAGCAAGACACAGTCGCTATGGGCTAC
ACAACAGACGACAGTCTGCCACTAGAGACGCAGAGAACCAAAGCCAAGAAGACAAAGAAG
AAGAAAGAGAAGAAGATACAGGAACCGAAGGTAGATAGGAGGAGAAAGCCGTTCCTTAAC
GATGACCTGAATGAGAGTCTGTTCACTATCACCGATCTGACCTTGGAGGAACAAATAGCT
GATATCCAGAAGAGACAGGAGAGTTCTAACTTCAAGAATTCAGTGTACAAGTGTATGGAG
TGCTTTAAGGGTTTCCTTGATGAAGGAGCGTACAACGGACATATGACAAGGCATACTACT
TCTGTGTACGGTGTTATGGAGGATTATAGAGGTGTCAGAATGTTGCCAGTATCAGCGAGA
CGCAGGGATTTGAGGAAGCACAATCTGACTATGGCCAACGTCATCACAGATAGCAATGAG
ACCAGACAGCACCTCGACGATAGGCTAAACCTGCACCAGGATTCCATAACCAAGATGTCG
TATGTCGTGGCGAAGATCTGCTTCGATATGCTGAACGCTACCGAGAACAGAATCTTCACG
CACACTTGGGGCTACAAGGACAAAAACGGCAACTGGCAGGGCATCATCGACCATCTGCTC
AAGAAGAAGGCGGATCTTGGTACCCTGACTATATTTACCCAGGAGCGCATGAAGGCCATA
GACTACATAGCCATGGTAGGTTCTACCGCGGTCCGGTTCGTGTTCAGAGAGCCCCCGCTG
GCTCTATTGGAGAATATCTTCACTTTGCCATTCACATCGGCTGTATGGATAGCGATCGGC
ATCTGCGTGCTTGGTTGTGCTGTATTCTTATACATAACATCTAAATGGGAAGCCACGGTG
GGAATGCATCCGTTACAGCTAAGCGGTTCATGGGCGGATGTGTTGATACTGATCATAGGA
GCCGTCCTTCAACAAGGATGTACGCTTGAACCAAGATACGCCGCTGGTCGATGTGTGACC
TTACTGTTGTTCGTGTCTCTCACCGTGTTGTTCGCGGCGTACTCCGCCAATATCGTGGTG
CTGCTCCGAGCCCCCAGCAGCTCTGTGCGCTCGCTGCCCGACTTACTGAACTCACCGCTG
AAGCTGGGTGCCAGCGACTTTGAATACAACCGGTATTTCTTTAAGAAACTCAACGATCCC
ATACGCAAGGCAATTTATAGCAAGAAAATAGCTCCGTCAGGCAAGAAGCCAAACTTCTAC
AGCATGAAGGAGGGAGTCGAGAAGATAAGGAAGGGATTATTCGCTTTCCACATGGAACTT
AACCCCGGATATCGCTTAATCCAGGAGACTTATCAGGAAGAGGAGAAATGTGATTTGGTT
GAGATCGATTACATTAATGAAATTGATCCCTGGCTGCCCGGACAGAAGCGATCGCCTTAC
AAGGATTTGTTTAAAATAAGGTCATAG
Protein sequence:
MADSNTRYHAMIYKDDYLPQNLCIECMQRLKNCYKFRTQTLQAQTIIVDLIRIGNFTTEA
IKSLNHNPKCKLQMQRFDANHCDAYINKEDVNPIQEIVIEEQVKIEKEFINEQDTVAMGY
TTDDSLPLETQRTKAKKTKKKKEKKIQEPKVDRRRKPFLNDDLNESLFTITDLTLEEQIA
DIQKRQESSNFKNSVYKCMECFKGFLDEGAYNGHMTRHTTSVYGVMEDYRGVRMLPVSAR
RRDLRKHNLTMANVITDSNETRQHLDDRLNLHQDSITKMSYVVAKICFDMLNATENRIFT
HTWGYKDKNGNWQGIIDHLLKKKADLGTLTIFTQERMKAIDYIAMVGSTAVRFVFREPPL
ALLENIFTLPFTSAVWIAIGICVLGCAVFLYITSKWEATVGMHPLQLSGSWADVLILIIG
AVLQQGCTLEPRYAAGRCVTLLLFVSLTVLFAAYSANIVVLLRAPSSSVRSLPDLLNSPL
KLGASDFEYNRYFFKKLNDPIRKAIYSKKIAPSGKKPNFYSMKEGVEKIRKGLFAFHMEL
NPGYRLIQETYQEEEKCDLVEIDYINEIDPWLPGQKRSPYKDLFKIRS