| New model in OGS2.0 | DPOGS203435 |
|---|---|
| Genomic Position | scaffold244:- 98900-100971 |
| See gene structure | |
| CDS Length | 1374 |
| Paired RNAseq reads | 579 |
| Single RNAseq reads | 1415 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001685 (3e-07) |
| Best Drosophila hit | CG5245 (8e-40) |
| Best Human hit | zinc finger protein 778 (5e-54) |
| Best NR hit (blastp) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (3e-58) |
| Best NR hit (blastx) | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein dp) (ZNF-dp) [Acyrthosiphon pisum] (2e-64) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005634 nucleus GO:0046872 metal ion binding GO:0006350 transcription GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like |
| Orthology group | ND |
Nucleotide sequence:
ATGACTTCAGAGTTTATCCAAATTAAGAAAGAGCCAGTGTGTGGCGAAACACCATCGTCC
CATGAAATCGTAAATAATGTTAATAATAAACAAATTACAGAAAATGTCGGTGTCTTTGAA
CAGAAAATAGTAAGTGTTGAATTTGTGAACATTAAAGTGGAGCCGCGGGACGATGTTAAA
CATGAGCCCAGCCTGCTTGTTGAGACCTCAACATTTCACAATACAACCATTAAAGAGGAA
CCCGGTTACCACAACATAGACGTAGAAGTGTCCATTAAAGAAGAGCCCTTGGATAGTGAT
CATGTGGAGTCGTCCAACTTCAGTGTGCCCGAGACTGTGAGAGGTCCCCCATGTAATGTT
TATATCAGTAATGTGTCGGAGGAGGTGTTGAGTCTGAACTCGACTGTGGACGGTAAGTAC
ATGTGTCCCATATGTTACAAGAGATTCGCCAACAAAGGTAATGTTCAGAGACATGTGGCT
CTACACTCGAGGGAGAAATGGGAGTGTGAAGTGTGCTTTAGACAGTTCTTCAAGAAGATG
CTGTATGAGAAGCACGTCCTGACGCATTCCACGGAGAAGAGATTCAAGTGTGAGGAGTGC
CAGAAGACGTTCAGGACGTCCTCCAACCTGGAGCAGCACAAGAGGATACATCTCACGGTC
AAACCCTTCGAGTGTGACACCTGCAAGCGACAGTTCTCCGTGAGAGCGAACTTACTGAAG
CATCAGGGCGCGGGCAGGTGTAAGAAACCCAGCGACAAGCCCATAGAGTGCGGAGTCTGT
CAGAAGGTTTTCCAGAAGGAGTTCCTGTTGAAGAGTCACCTCAGGAGACACACGACGGAG
CGGCCGTTCGTCTGCGACAAATGTAAGATGAGTTTCAAGTACAAGTCGACTCTGATACGT
CACGTGCAGCTCCACAACGGCATCAAACCTTACTCCTGCAAGATATGCAGGAAGAGGTTC
ACCCACGCGGGACTCATCAAACCTCACATGAGGAAACACACGGGCGAGAAGCCCTACTCG
TGTCCGGTCTGCGCCAAGAGCTTCGCCCACAAACACAACATGCAGCGACACACGGTCCGC
CATTCGAAGATAAAGAACACGGTGTGCGCCGTCTGCAACAAGACATTCCCCAAGGAGAGC
CGGCTCATCTACCACATGAGGACGCACACCAACGCGAAGCCGTTCGCGTGCGGAGTCTGC
GAGAAGAAGTTCTCCCACAGGCAGAACATCATCAGGCACTACGGGCGGAAACATCCCGGA
GACACGTACGAGTGTCGGGACACGGACGCCAGCGTGGCCAAGGACGTGTGGGAGAACGTC
GTGAGGAACATGAACCCGGACGCGCACGGCGACGTCAGGATAACGCCGGACTGA
Protein sequence:
MTSEFIQIKKEPVCGETPSSHEIVNNVNNKQITENVGVFEQKIVSVEFVNIKVEPRDDVK
HEPSLLVETSTFHNTTIKEEPGYHNIDVEVSIKEEPLDSDHVESSNFSVPETVRGPPCNV
YISNVSEEVLSLNSTVDGKYMCPICYKRFANKGNVQRHVALHSREKWECEVCFRQFFKKM
LYEKHVLTHSTEKRFKCEECQKTFRTSSNLEQHKRIHLTVKPFECDTCKRQFSVRANLLK
HQGAGRCKKPSDKPIECGVCQKVFQKEFLLKSHLRRHTTERPFVCDKCKMSFKYKSTLIR
HVQLHNGIKPYSCKICRKRFTHAGLIKPHMRKHTGEKPYSCPVCAKSFAHKHNMQRHTVR
HSKIKNTVCAVCNKTFPKESRLIYHMRTHTNAKPFACGVCEKKFSHRQNIIRHYGRKHPG
DTYECRDTDASVAKDVWENVVRNMNPDAHGDVRITPD