New model in OGS2.0 | DPOGS212941  |
---|---|
Genomic Position | scaffold736:- 13694-17238 |
See gene structure | |
CDS Length | 1410 |
Paired RNAseq reads   | 1897 |
Single RNAseq reads   | 4632 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011609 (8e-110) |
Best Drosophila hit   | Gram-negative bacteria binding protein 3 (5e-47) |
Best Human hit | ND |
Best NR hit (blastp)   | RecName: Full=Beta-1,3-glucan-binding protein; Short=BGBP; AltName: Full=Beta-1,3-glucan recognition protein; Short=BetaGRP; AltName: Full=Gram negative bacteria-binding protein; Flags: Precursor (2e-155) |
Best NR hit (blastx)   | RecName: Full=Beta-1,3-glucan-binding protein; Short=BGBP; AltName: Full=Beta-1,3-glucan recognition protein; Short=BetaGRP; AltName: Full=Gram negative bacteria-binding protein; Flags: Precursor (8e-155) |
GeneOntology terms    | GO:0005576 extracellular region GO:0045088 regulation of innate immune response GO:0051635 bacterial cell surface binding |
InterPro families    | IPR008985 Concanavalin A-like lectin/glucanase IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR000757 Glycoside hydrolase, family 16 |
Orthology group | MCL17866 |
Nucleotide sequence:
ATGCCAGTGACCGGGGTTGGACGAGTGCTCGCGGTGGTTTTATTATGCGCACATTTAAGT
GACGCCCAGTTCACTGTACCGGATGTCATAATACAGGCATTAAGACCGAAAGGTCTTCGT
GTTTATATACCAGATTCTCCAAATGTAAGTTTGTTTGTGTTCCAAGGGAACATTAATAAA
AAAATTGGTGAAAATGATGTCGGTACTGTATCAGCAGAGATTACCAAACCCACAGACGGA
AAGTGGCTCTATGAAAATCGGAATTTGGATTTAAAAGTCGGTGACGTCATCAATTACTAC
GTTTACGTGGTTAGCGATAAAAAGGGTTATCTTAAAGACAACCTATCATTCACAGTAAAA
GCTCTCGAAAGCCCGACTTCAAACCCTGCGGCAGATTGTAGGAACACTCCAAGTGTTGTT
CGAAACGGGAAAGCTTGCGCCGGGCAAGTTTTGTTCGAAGACAATTTTGATAGTTTAAGA
GAAGATTTGTGGCAAATTGAACAATATATACCCGATGAGCCTGATTTTCCTTTCGTTTCC
TACCAGCGACCGCCGAATGCACCAACGGTGGTCGTGGAAGGAGGGTATCTGAAGATTGAA
CCTAAACTGCAACAAGATCTGCCTGGATATTCTAATAATTCAATATATATGGGAAAATTA
GATCTTTTAAATGGTTGTACAGCTGTTTCATCGAAATGTCACGTTGAAGCGTGGGGAGCA
AGTATAATACCACCAATAGCCAGCGGCAAACTTACATCAAAGACATTTGGATTCACATAC
GGCGTTGTTGAAGTGAGAGCAAAATTACCTCAAGGGGACTGGATTTATCCAGATATACTA
ATCGAGTCGCTATTCAAAAAATATGGAGTTACAAACTACGCGTCGGGTGTCATAAGGATT
GCTGGTGCGTTGGGAAACCAACAGTTGTCGGCTGGAACTATTGAAATGGGAAACAAGGTC
TTGTATGGTGGTCCAATAATGGACTTGAAGTGTCGAAGAAGTTTACTCAGCAAGAAAAAC
TCAAACAAGCCCTGGGGAGACGATTTCCATATATACACTCTACGTTGGGAACCAGAGAGA
ATAACGTTATTTGTGGACGGTGAAGAATGGGGTCGCACGGAACCAGCCGCGAGTGGTCTT
CGTGGGAGATTAGGACCTAATTGTGATGCACCTCGCGCTGCAGCTACCGACCTATCACCT
TTCGACGATTACTTCTTCCTTACATTGGGTTTGACGACGGGTGGAGTTACTGAATTCGAT
GATGACGTAACGTCCCAAGGAATACCAAAACCGTGGAGAAACACTGGTCGCAAGGCTAGT
TTAAGATTTTGGCAAGACATGTCTTCTTGGCTTCCGACGTGGAGACAGCCAGCTTTACTC
GTAGATTACGTTAGAGTTACAGCTCTTTGA
Protein sequence:
MPVTGVGRVLAVVLLCAHLSDAQFTVPDVIIQALRPKGLRVYIPDSPNVSLFVFQGNINK
KIGENDVGTVSAEITKPTDGKWLYENRNLDLKVGDVINYYVYVVSDKKGYLKDNLSFTVK
ALESPTSNPAADCRNTPSVVRNGKACAGQVLFEDNFDSLREDLWQIEQYIPDEPDFPFVS
YQRPPNAPTVVVEGGYLKIEPKLQQDLPGYSNNSIYMGKLDLLNGCTAVSSKCHVEAWGA
SIIPPIASGKLTSKTFGFTYGVVEVRAKLPQGDWIYPDILIESLFKKYGVTNYASGVIRI
AGALGNQQLSAGTIEMGNKVLYGGPIMDLKCRRSLLSKKNSNKPWGDDFHIYTLRWEPER
ITLFVDGEEWGRTEPAASGLRGRLGPNCDAPRAAATDLSPFDDYFFLTLGLTTGGVTEFD
DDVTSQGIPKPWRNTGRKASLRFWQDMSSWLPTWRQPALLVDYVRVTAL