| New model in OGS2.0 | DPOGS207210 |
|---|---|
| Genomic Position | scaffold425:+ 69613-72113 |
| See gene structure | |
| CDS Length | 1158 |
| Paired RNAseq reads | 250 |
| Single RNAseq reads | 591 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010706 (5e-86) |
| Best Drosophila hit | bagpipe (2e-29) |
| Best Human hit | homeobox protein Nkx-3.2 (5e-30) |
| Best NR hit (blastp) | PREDICTED: similar to Homeobox protein bagpipe (NK-3) [Tribolium castaneum] (6e-36) |
| Best NR hit (blastx) | PREDICTED: similar to Homeobox protein bagpipe (NK-3) [Tribolium castaneum] (2e-34) |
| GeneOntology terms | GO:0048703 embryonic viscerocranium morphogenesis GO:0043565 sequence-specific DNA binding GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0030528 transcription regulator activity GO:0045449 regulation of transcription GO:0005634 nucleus |
| InterPro families | IPR020479 Homeobox, eukaryotic IPR017970 Homeobox, conserved site IPR001356 Homeobox IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL20412 |
Nucleotide sequence:
ATGGAGTCCAAATTAAATTACAAAGACACTCGCATACAGGACAGTGATAAAACCAATATA
AATCTGACGACACCGTTCTCAATAAACGACATTCTGACTAGAGAGAATGAATCCAAGTGC
AATTTTGAAAATGGAATGTTTTGCTCGGACGCGTTCGGCGGGAAAATGAAATGTCACAAA
CCGGCCAGTTACAATAAAGACGATTATAAGAAAGAGGCCACTGAAAAGAGTATGAATTAC
TACGACGATAATTATAAGGATTACACTGATGATGGAGCCATTGATATGTCTAGGAAGAAT
AATTTCCCAGTCACAGAATTATCCGATGACTACGACTCCCGCTCGTCCAACACTGGCTCT
CCGCGACGTCACTCCTCCCCCTCCTGCGACAGCTACCGGCCCTTCATACAGTACGACAGG
AAGTGCAGCACCCCCACAGACTCTAGACACGGGTACATGGAGTACACACAGAACAGCGGG
CGCAAGAAACGCTCCAGGGCCGCCTTCTCCCACGCTCAGGTGTACGAGCTGGAGAGGAGA
TTCAGTCAACAGAGGTATCTATCGGGACCAGAGCGCGCTGACCTCGCCGTCAGTCTGAAA
CTGACGGAGACGCAGGTCAAGATCTGGTTCCAGAACCGACGGTACAAGACTAAGAGGAAA
CAGATGCAGTTACAAGAGAGCGGCTTACTAGCGAACCACGCGAGGAAGGTGGCTGTGAAG
GTGCTGGTTAACGGACAGCTCCCGGACATTAAGGCGTACCAAGCACCGTGCAAGAACCCA
GCACTGTTCCCGCCACCGATGCTTGATAACTCGATAATAAAGCACTTCGCCGGCGTCTAC
GATTTTGCTAAAAATCCCGAATACAAGGCACTCCTGCAAGAGTCCTACAACCAGGCTGTG
TTACAATCGCTGTACGCTCCGCACATGGGGGTAAATTACCCGAATTTACCCTTATCGTAT
ATGTATTACCCCGGACATCCAGCGTTCGGGATGCCGTGCGACATGAATGGGGAGACTAGC
GACAAGTACGCGGGTAACAGGGGTAACGGGGGTAACAAAGGTAACGAGGGTAACAAGGGT
AACGATAAATGCAAACCAATGGACGTCAACGAGAATAGCAACGATAGTGTTGCGAGCAAC
ATAGAAGTCGAAAATTAA
Protein sequence:
MESKLNYKDTRIQDSDKTNINLTTPFSINDILTRENESKCNFENGMFCSDAFGGKMKCHK
PASYNKDDYKKEATEKSMNYYDDNYKDYTDDGAIDMSRKNNFPVTELSDDYDSRSSNTGS
PRRHSSPSCDSYRPFIQYDRKCSTPTDSRHGYMEYTQNSGRKKRSRAAFSHAQVYELERR
FSQQRYLSGPERADLAVSLKLTETQVKIWFQNRRYKTKRKQMQLQESGLLANHARKVAVK
VLVNGQLPDIKAYQAPCKNPALFPPPMLDNSIIKHFAGVYDFAKNPEYKALLQESYNQAV
LQSLYAPHMGVNYPNLPLSYMYYPGHPAFGMPCDMNGETSDKYAGNRGNGGNKGNEGNKG
NDKCKPMDVNENSNDSVASNIEVEN