| New model in OGS2.0 | DPOGS207224 |
|---|---|
| Genomic Position | scaffold760:+ 134065-144082 |
| See gene structure | |
| CDS Length | 1716 |
| Paired RNAseq reads | 544 |
| Single RNAseq reads | 1498 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008555 (5e-142) |
| Best Drosophila hit | CG9009 (6e-84) |
| Best Human hit | acyl-coenzyme A synthetase ACSM3, mitochondrial isoform 1 (1e-26) |
| Best NR hit (blastp) | AMP dependent coa ligase [Culex quinquefasciatus] (4e-108) |
| Best NR hit (blastx) | AMP dependent coa ligase [Culex quinquefasciatus] (2e-102) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
| InterPro families | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL40289 |
Nucleotide sequence:
ATGTTTCGTATAAGACGTCATGTTCATTTACATTTTTTTTTATCTCTATCTAGTCAACAT
CAAGCTCGTACCAAAAAGAGACCATTAAACAAAGACACATACACAATGGCAACGGTCTTA
CATCGGAGGGCTCTACGAGTGGTTAATAAAGGAAAACTTTTCTTAGCCACATTATCCCGA
GATAACAGCACAGAAAAACATATCTTGAGATCAGACTCTGGTGGTATAGAGAAGCCAAGA
CAAACTGTCACTGAATTTGTGTGGCAAAACTTAGATAAATGGCCTGACAAAACATTAGCT
GTTTGTGCTGTAACTGGCCGCGGTTACACCTACGCTCAAACACATAGATTATCTGTTTCC
TTTGCAGCATCATTACTTAAGAAACTCAAACTTCAACACAATGATAAGGTTGCCATTGTC
TTACCAAATGTTCCCGAATATCCAGCCATCGCTTTTGGTATTTTGGAGGCTGGCTGTATC
GCTAGCATGATGAATCCTGCTTACACAGTTGATGAACTCAAACATCAAATAAAACTCGTC
GAGTGTAAGGCAATAGTAGCATCCAAATTATCGTATCCAAATTTGTATAAAGCACTGCAA
GAACTAAAAATGAACATACCTGTGATATTAATTGACAATGAAGATCTACCCGAAAATACT
ATAAAGTTTGCTGAACTCGCTGAAAACACAGACACGGATATATTGAAATCGGTAAAACGA
AACATCAAAGACACAGCCATCCTGCCATTTTCCAGTGGAACAACTGGTTTCCCCAAAGCC
GTTGAACTGACCCATGAAAGTATATGCGCTCTTAATAGCATGATATTGACTCCAGGAATT
ATAGCTGTCCAAGAAGCTACAGTGACGAGAGGAAGCTTGTCATCATTCCATGGATTCACC
GTGCGGGTGGCGGGTCCATCGCGGCGCAGGGAGAGGAGCTTCAACAGTGCCTGGGACTTG
CGACCCAGGTCGATCTTCCTGGGGAAGCACCCGGCTGTTACACCGCGGCACTTGGACTCC
GTCATCGACATTATCTGTGGCGCCGCCTCCCTCTCTAGTGGAGACGCTATGGCTATTATT
GAAAAGAATAAGAATTTAATCTTCCGTCAAGGCTATGGCCTTACTGAGACAAACGGTGGC
GTGGCCATCGGTTATAACGACAATACAAATCACGATGCTGTAGGATTCCCTTTCCCGAGC
AGCGAAATAAAGATAGCTGATCTGAGTACCCAACAAGCTTTAGGACCGGGACAGGAAGGA
GAAATTTGGTACAGGGGTCTTAACGTAATGAAGGGTTATTACAAGAATGAAGCAGCGACC
AAAGAGGTCCTTACAGAAGACGGCTGGTTCAAAACTGGTGACGTCGGAAAATACGATGAA
AACAAATATTTGTATATTACTGACAGAATAAAGGAACTCATTAAGGTTAAAGGCTTCCAA
GTGGCACCAGCGGAACTGGAAACGGTTCTTCGTAGTCATCCAAAGATCCTCGATTGTGCT
GTTCTTGGTATCCCAGACCCTTTTTCCGGGGAAGTCCCCAAAGCATTCGTCGTCGTCCAA
CCAGGACAGAACATTAAGGGAGAGGAAGTTCTGGAACACGTTAACAGTAAATTGACACAG
TTCAAGAAAATTAAGGAAGTCCAATTCGTTGACGCGATACCCAAAAACCCAGCTGGGAAA
ATAATGAGGAGACAATTGAAAGAGAAATATTGTTAG
Protein sequence:
MFRIRRHVHLHFFLSLSSQHQARTKKRPLNKDTYTMATVLHRRALRVVNKGKLFLATLSR
DNSTEKHILRSDSGGIEKPRQTVTEFVWQNLDKWPDKTLAVCAVTGRGYTYAQTHRLSVS
FAASLLKKLKLQHNDKVAIVLPNVPEYPAIAFGILEAGCIASMMNPAYTVDELKHQIKLV
ECKAIVASKLSYPNLYKALQELKMNIPVILIDNEDLPENTIKFAELAENTDTDILKSVKR
NIKDTAILPFSSGTTGFPKAVELTHESICALNSMILTPGIIAVQEATVTRGSLSSFHGFT
VRVAGPSRRRERSFNSAWDLRPRSIFLGKHPAVTPRHLDSVIDIICGAASLSSGDAMAII
EKNKNLIFRQGYGLTETNGGVAIGYNDNTNHDAVGFPFPSSEIKIADLSTQQALGPGQEG
EIWYRGLNVMKGYYKNEAATKEVLTEDGWFKTGDVGKYDENKYLYITDRIKELIKVKGFQ
VAPAELETVLRSHPKILDCAVLGIPDPFSGEVPKAFVVVQPGQNIKGEEVLEHVNSKLTQ
FKKIKEVQFVDAIPKNPAGKIMRRQLKEKYC