| New model in OGS2.0 | DPOGS201038 |
|---|---|
| Genomic Position | scaffold757:+ 34304-38068 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 394 |
| Single RNAseq reads | 1052 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008076 (3e-136) |
| Best Drosophila hit | CG17691, isoform C (2e-128) |
| Best Human hit | 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor (8e-127) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP007531-PA [Tribolium castaneum] (3e-159) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP007531-PA [Tribolium castaneum] (1e-147) |
| GeneOntology terms | GO:0017086 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity GO:0046949 fatty-acyl-CoA biosynthetic process |
| InterPro families | IPR005475 Transketolase-like, pyrimidine-binding domain IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II IPR015941 Transketolase-like, C-terminal IPR005476 Transketolase, C-terminal |
| Orthology group | MCL15568 |
Nucleotide sequence:
ATGAGTTTCTTAGCTCAAAAACTTTTCAGTTTCGGTGGTGCTATTAAAAATGTAAACAAA
AATTCTATTAGACTTTCTTCTCATTTCATATATCATCCAGATAATGAAAAACCCATTGAA
GGAGAAACAAAAAAGATGAACATGATGCAAGCTATAAACGATGCAATGGACATCACACTC
AAAAACGATCCAACGGCTGTTTTATTCGGAGAAGATGTCGGCTTTGGAGGTGTTTTTAGA
TGTGCCTTGGGATTACAGGAAAAGTATGGCAAAGACAGAGTATTTAACACACCATTGTGT
GAGCAGGGTATTGCAGGGTTTGGTATTGGATTAGCGACGGCCGGTGCTACTGCCATAGCT
GAAATACAGTTTGCAGATTATATATTCCCAGCCTTTGATCAGCTTGTAAATGAAGCAGCT
AAGGCTCGATACAGATCGGGCGGTCAGTTTGACTGCGGCGCGTTGACGGTTCGCGCTCCG
TGTGGTGCCGTGGGCCACGGAGGGTTGTACCACTCACAGAGCCCTGAGGCATTCTTCGCT
CATGCAGCTGGGCTCAAGGTGATAGTACCAAGAGGTCCAATTGCTGCGAAAGGTCTTTTA
TTGGCGTGCATCCAAGAAAGGGACCCCTGTATTTTCTTAGAACCAAAAATTTTATACAGA
TCTGCCAATGAAGAAGTCCCTATTGATAGTTATACTTTACCCATCGGAAAGGCTCAAATT
TTAAGAGAAGGTAATCAAGTCACTTTAATAGCGTGGGGTACACAAGTACACGTTTTACTG
GAAGTTGCTAAACTAGCAAAGGAGCAGTTTGACGTTAGTTGTGAGGTCATAGATCTCATG
TCAATACAACCGTGGGACGAAGTGACTGTTTGTGATTCAGTGAAAAAAACCGGAAGATGT
CTAATAGCGCATGAAGCTCCACTCACTTGCGGTTTCGGCGCTGAATTGGCAGCCACTATT
CAGGAGGAATGCTTTCTTCACCTGGAGGCACCTATATCACGTGTGACAGGCTGGGATGCG
CCCTTCCCTCATGTGTTCGAACCCTTCTACTTACCAGACCGTTGGCGATGTCTAGAAGCC
ATCAAACAATTGGTGCAGTACTAG
Protein sequence:
MSFLAQKLFSFGGAIKNVNKNSIRLSSHFIYHPDNEKPIEGETKKMNMMQAINDAMDITL
KNDPTAVLFGEDVGFGGVFRCALGLQEKYGKDRVFNTPLCEQGIAGFGIGLATAGATAIA
EIQFADYIFPAFDQLVNEAAKARYRSGGQFDCGALTVRAPCGAVGHGGLYHSQSPEAFFA
HAAGLKVIVPRGPIAAKGLLLACIQERDPCIFLEPKILYRSANEEVPIDSYTLPIGKAQI
LREGNQVTLIAWGTQVHVLLEVAKLAKEQFDVSCEVIDLMSIQPWDEVTVCDSVKKTGRC
LIAHEAPLTCGFGAELAATIQEECFLHLEAPISRVTGWDAPFPHVFEPFYLPDRWRCLEA
IKQLVQY