| New model in OGS2.0 | DPOGS212590 |
|---|---|
| Genomic Position | scaffold1031:- 555-5218 |
| See gene structure | |
| CDS Length | 1197 |
| Paired RNAseq reads | 52 |
| Single RNAseq reads | 156 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005193 (4e-101) |
| Best Drosophila hit | neither inactivation nor afterpotential B (6e-109) |
| Best Human hit | beta,beta-carotene 15,15'-monooxygenase (1e-56) |
| Best NR hit (blastp) | neither inactivation nor afterpotential B [Galleria mellonella] (0.0) |
| Best NR hit (blastx) | neither inactivation nor afterpotential B [Galleria mellonella] (6e-179) |
| GeneOntology terms | GO:0007604 phototransduction, UV GO:0007603 phototransduction, visible light GO:0016063 rhodopsin biosynthetic process GO:0007602 phototransduction GO:0003834 beta-carotene 15,15'-monooxygenase activity GO:0035238 vitamin A biosynthetic process GO:0009110 vitamin biosynthetic process GO:0016119 carotene metabolic process |
| InterPro families | IPR004294 Carotenoid oxygenase |
| Orthology group | MCL11024 |
Nucleotide sequence:
ATGGAACAGTGTAAAGAAAAACTTTATCCAAACTGTGACAACCAAGTCTGGCTGCGGTCT
TGTGAAGTTGAAGTAAATGAGCCGATAACTGGCGAAATTACAGGAGAATTTCCAAGATGG
GTCCGAGGAAGCCTACTCCGTAACGGTCCCGGGTCTTTAAAAGTTGGCTCAATGAGATTC
AAACACCTGTTTGATAGTTCTGCATTACTTCACAGGTTCAATATACAGGATGGTCAAGTG
ACCTATCAATGTCGCTTCCTTCGGTGTAACACCTACAATAGAAACATGGCCGCGGGTCGT
ATAGTTGTCACTGACTTCGGCACTCAGTCCGTACCAGACCCTTGTCATTCGATTTTCGAC
AGATTTGCTACGCTATTTTCTCCAGGCGAAGCTTTGTCAGACAACGCTATGATTTCAGTT
TACCCTTTCGGGGACGAAATGTATGCGTTCACAGAAGGACCAGTCATTCATAGAATAAAT
CCGGTGACGTTGGACACTATGGAGCGAAAGAATCTTATGGATAGTGTCGCTCTTGTGAAC
CACACCTCCCACCCTCATGTTATGTCTAATGGTGACGTGTACAATGTCGGCATGTCTCTT
GTTAAAGGCCGACTTCGACATGTCGTTGTTAAGTTTCCATTTATGGAAAAAGGAGATATG
TTTCAAAACGCAACCATAGTAGGCAGTATGAAACCTCGCTGGACATTACACCCGGCGTAC
ATGCACACATTTGGGATAACGGCCAATTACTTCGTCATAATTGAACAGCCCCTGTCCGTG
TCAATATGTAGGCTGGTACACAATCAGCTCAGGAACCGGCCTCTAGCCTCCAGCCTGAAG
TGGTACCCGGAACATAAGACGAATATCGTACTAATAAATCGCGAAACTGGTAAAGAGGTG
AAGAGGTATGAGACGGAGACACTATTTTTCCTCCACATCATTAACTGTTACGAGATTGCT
AACAAACTGATAGTAGATCTGTGCTCGTACAAGGACGCCAAAATATTGGACGCCATGTAC
ATCCAAGCTATTGAGACAATGCAAACTAACGCAAATTACGCGGATTGGTTTCGAGGGAGA
CCTAAGAGAATTGAAATAGACCTGAATGCGCCCATTCTGACGCACTTCAAGCCGAGGTTG
TTGGCCGATTTGGGCTGCGAGACACCCAGGATTCATTACGATGTTTATAATGGTTAG
Protein sequence:
MEQCKEKLYPNCDNQVWLRSCEVEVNEPITGEITGEFPRWVRGSLLRNGPGSLKVGSMRF
KHLFDSSALLHRFNIQDGQVTYQCRFLRCNTYNRNMAAGRIVVTDFGTQSVPDPCHSIFD
RFATLFSPGEALSDNAMISVYPFGDEMYAFTEGPVIHRINPVTLDTMERKNLMDSVALVN
HTSHPHVMSNGDVYNVGMSLVKGRLRHVVVKFPFMEKGDMFQNATIVGSMKPRWTLHPAY
MHTFGITANYFVIIEQPLSVSICRLVHNQLRNRPLASSLKWYPEHKTNIVLINRETGKEV
KRYETETLFFLHIINCYEIANKLIVDLCSYKDAKILDAMYIQAIETMQTNANYADWFRGR
PKRIEIDLNAPILTHFKPRLLADLGCETPRIHYDVYNG