| New model in OGS2.0 | DPOGS209337 |
|---|---|
| Genomic Position | scaffold3754:+ 5551-7834 |
| See gene structure | |
| CDS Length | 1326 |
| Paired RNAseq reads | 72 |
| Single RNAseq reads | 163 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004251 (9e-65) |
| Best Drosophila hit | ornithine decarboxylase 1 (5e-60) |
| Best Human hit | ornithine decarboxylase (5e-61) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC015912 [Tribolium castaneum] (1e-78) |
| Best NR hit (blastx) | PREDICTED: similar to ornithine decarboxylase [Tribolium castaneum] (2e-73) |
| GeneOntology terms | GO:0005515 protein binding GO:0008284 positive regulation of cell proliferation GO:0001822 kidney development GO:0009615 response to virus GO:0006596 polyamine biosynthetic process GO:0016829 lyase activity GO:0004586 ornithine decarboxylase activity GO:0005829 cytosol |
| InterPro families | IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPR000183 Ornithine/DAP/Arg decarboxylase IPR002433 Ornithine decarboxylase |
| Orthology group | MCL25375 |
Nucleotide sequence:
ATGGTGTATGAAAAGAGAGTCTCAAAGGCTTTGGTATTGGAAAACAATACCGCTGAAGAT
GTAGCTAGAGCTATGATAGAAAGTGGACTTCAGAAGGAGCCCTTCTATATATTTGATATG
GACAAGGCTTACCAGTTCATACAGCATTTCAGAAAAATGATGCCAAGGATCAAAATGTTT
TATGGTGCCGTGAAATCGAACGATAGTTGCATGATGTTAAAGTTAGCCGCTGCACTCGGT
GTTGGCTTCGATTGTGCTTCACCGGGTGAAATATATAGAATATTAAAACTCAAAGTATCG
CCACAGAGCATAATTTTAGCAGTTCCGACAAAAACACCGGAGTGGATCTCATATGCAAGA
CAGTCCGGGATTAAACACGCTACTTTCGACAACATTTGCGAACTAAAAAAAATAAAACAG
TATTGGCCAGAGGCAAACTTATTACTGCGTATAAGAGTTCACGCCGACAGTGTTTACGAT
TTAGGAAAAAAATTCGGTTGCGATTTTGAAACAGAAGCTATTGATTTACTAGAAGAAGCT
GCAGCGCTCAATATCCGGGTGGTTGGGGTAGCTTTCCATGTAGGAAGTGGTTGTACATCA
CCAGACAGCTATGTGATGGGACTTCAACAGGCTAAGCTATTGTTCGAGCATGAGGCTAAG
GCGGGGCGGAAAATGGAAATTGTTGATATTGGAGGAGGATATATGAGCGATAAAATCGAT
AGAATAGACGAGGTGTCTAAGCTCATAAATAAGGCTTTGGATGAACTCTTTCCTGATCCA
GATATCCAAGTGATCTCTGAACCAGGACGTTACCTGTGCGATAAAGCATTTACTTTATAT
TGCAATATTAACACAGTGCGACAGGTACAAGTTGGTGACTCTTCTATAAATATGTTGTAT
TTGAATGACGGATTGTTTGGTTGTTTGCGGTACAATGAACCGTGGCACACCGTCAGGCGG
TATAAGCAATGTAAGGAAGGCGAACAATGTGAACCAGTTATTTTATGGGGTCCATCATGT
GACTCAGTGGATCGTGTGATGGAGAACGTTGAAGTTATGTTACCACCTTGTACTGTTGAT
GATTGGCTCGTTTTCCCCAACCAAGGAGCTTATACCATGACTCTCGCCTCCGATTTTTCT
TCGTTACCAGAACCGCGTATCCGAAGTGTTATTTCACAGAAATTGTGTGAAAAAATAAAG
GAGTCAGAAGTGTTTGATTCAGATGACTTCTTCAAACAAGACATTTCAGAACCACTTCCA
TCTAGCTTGCCACCACTTGTCACTCAATCGAAAGTTATGGATTCAAATTATACTTTGAAG
GCTTAA
Protein sequence:
MVYEKRVSKALVLENNTAEDVARAMIESGLQKEPFYIFDMDKAYQFIQHFRKMMPRIKMF
YGAVKSNDSCMMLKLAAALGVGFDCASPGEIYRILKLKVSPQSIILAVPTKTPEWISYAR
QSGIKHATFDNICELKKIKQYWPEANLLLRIRVHADSVYDLGKKFGCDFETEAIDLLEEA
AALNIRVVGVAFHVGSGCTSPDSYVMGLQQAKLLFEHEAKAGRKMEIVDIGGGYMSDKID
RIDEVSKLINKALDELFPDPDIQVISEPGRYLCDKAFTLYCNINTVRQVQVGDSSINMLY
LNDGLFGCLRYNEPWHTVRRYKQCKEGEQCEPVILWGPSCDSVDRVMENVEVMLPPCTVD
DWLVFPNQGAYTMTLASDFSSLPEPRIRSVISQKLCEKIKESEVFDSDDFFKQDISEPLP
SSLPPLVTQSKVMDSNYTLKA