| New model in OGS2.0 | DPOGS207780 |
|---|---|
| Genomic Position | scaffold549:- 53471-62587 |
| See gene structure | |
| CDS Length | 3264 |
| Paired RNAseq reads | 1249 |
| Single RNAseq reads | 3172 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005477 (0.0) |
| Best Drosophila hit | multiple edematous wings, isoform B (0.0) |
| Best Human hit | integrin alpha-7 isoform 2 precursor (1e-92) |
| Best NR hit (blastp) | integrin alpha 1 [Pseudoplusia includens] (0.0) |
| Best NR hit (blastx) | integrin alpha 1 [Pseudoplusia includens] (0.0) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0050839 cell adhesion molecule binding GO:0004872 receptor activity GO:0007476 imaginal disc-derived wing morphogenesis GO:0008305 integrin complex GO:0048567 ectodermal digestive tract morphogenesis GO:0016337 cell-cell adhesion GO:0016477 cell migration GO:0030154 cell differentiation GO:0007494 midgut development GO:0007157 heterophilic cell-cell adhesion GO:0007160 cell-matrix adhesion GO:0007427 epithelial cell migration, open tracheal system GO:0007411 axon guidance GO:0007608 sensory perception of smell GO:0007431 salivary gland development GO:0007424 open tracheal system development GO:0007426 tracheal outgrowth, open tracheal system GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces GO:0007432 salivary gland boundary specification GO:0035160 maintenance of epithelial integrity, open tracheal system GO:0016203 muscle attachment GO:0007414 axonal defasciculation GO:0007435 salivary gland morphogenesis |
| InterPro families | IPR000413 Integrin alpha chain IPR013649 Integrin alpha-2 IPR013517 FG-GAP IPR013519 Integrin alpha beta-propellor IPR018184 Integrin alpha chain, C-terminal cytoplasmic region, conserved site |
| Orthology group | MCL10699 |
Nucleotide sequence:
ATGAAGCGTAGGCGCACTTCGCATTACCCCAATGAGGGCAAGATCGATCGTCGTGATGTG
GGCGCTATACCGTTTCTCATTATGAACCCTTTGTTGCTAGTCGGTGCTCCTTTGGGTCAA
AATTTGCAGCCAAACACGACAAAGTCCGGGGCGCTCTGGAGGTGCAGAGTGAATTCAGCT
CCTAGTGACTGCGAACAAATAGTCACGGACGGGAAACGAAGTCTTGACTCCTTCCATTTG
ACTGGGCCTCATCCAGATGAAATAAAGGACGGTCAATGGCTCGGCGTGTCCGTCAGGAGC
CAGGGTGCGGGGAAAAAGGCAGTCGTCTGTGCACACAGATACATTCGCAAATCTGGAGAA
TCTCAATTTGGACAAGGGCTCTGTTACACTCTCAGTAATGACCTTCAGCTGATCGACATG
TGGGAGCCGTGTCGAGGTCGCTCAGTTCAGAGGGAACACGAAGAATTTGGTTTCTGTCAG
GTTGGAACAAGTAGTTCTCTCCTTGAGGATGACACGTTAGTTCTAGGCAGTCCAGGGCCA
TATACTTGGAGAGGTACCATTTTCACTCAGGATACCAACGATGATTTGCTTGAACGTGAT
AATGTTGTCTACATGGCGCCAGTTGAAGATGGAGCCAGCCCAGTCGAGAAGTATAGCTAT
TTAGGTATGTCTGTATCTGGAGCTAATTTCTTCGGCCCGGAGGCATCGTATGCAGCAGGA
GCCCCTCGTGCTCATGGTACGGGTCAAGTAGTGCTTTTTAGTAAACGAGTAATTTATGAC
TGGACCAGAAATGATGTCAATATTCTCAATTTTACTCTGGTCCTCAATGGCGAACAGTTC
GGTTCTAGCTTTGGATACGAAGTTGCTTCAGCAGATGTTAACGGCGACGGATTACCAGAT
CTATTGGTCGGTGCTCCATTCTATTTTTCGCGCGATGCTGGTGGTGCAGTATATGTATAC
TTAAATGAAAAGCATAATCTTCCTCAAGATTACAGTCTTAAACTAACTGGCAAGCCTGAA
TCACAATTTGGTATTGCAATTGCTAATACCGGAGACCTCAATAGAGATGGTTGTGAAGAT
GTAGCCATAGGCAGTCCGTACGAAGGCAATGGCGTTGTGTACATTCATATGGGAGATAGA
AAACTTGGTCTTAAAGCGAAACCAGATCAGGTCATAAGAGCGGAATCCTTACCAACGGTT
ATGAGGACATTTGGCTATTCTCTATCTGGTGGAATGGACCTTGACGAGAATGGATATCCA
GATTTATTAGTCGGTGCTTATGAAAATAGTAGCATCGCACTTATCAGAACGAAACCGATA
ATCGACATAAAGACTTCGATAAAACCATCAAACACTATCATCAATATAGACCCTTCCGTC
CAAGGCTGCACAAAAGATCCCAATTCTAATTACACTTGCTTCACTTTCCAAGCGTGCTGT
ATAATCAAATCTCTGGTACGGTCAACTCAAAGCAACAGTCATGAGTTAAATTACGTCATC
GAAGCTGAAACTTTCCCTGGCGGAAGAAAATATTCCAGAGTGTTCTTCGATTCGGAAAAA
TCTATTATTATCAATAAAACGATACATCTGGGCAAAGACGTTGAAGACTGTAGAGAACAT
GTCGTGTATTTAAAAAATAATACCAGAGACATTCAGACACCAATCAAATTTCAAGTAACC
TACAAGATAGTACAGATCCAACCGAAATACTCAACTATAGGAGAATTACCCAGAATAGAT
GATTATCCAGTACTGAATGCTACCGCGACATCGTCCTTCAGCGCTAACTTCCTTAACGAC
TGTGGTTTGGATGGAGTATGCGTTAGTGATCTGGTCGTGGAACCCGTATTACAATTACCT
AAAACTGAGGATGGAAAATCATATGCTTTAACCCTTGGTCAGGAAGAGGAAATAAAACTC
TCCATATCAGTAGACAATTATGGTGAATCTGCGTATGAAGCCCAACTGTTCGTCCAACAC
CATGCCAGTTTGCACTACATTGCCGCGAATATTACAGGCAAGCACATGATATGCACGAGT
GTAAACAAGACGACGGTGTCATGCCTTCTTGAGAATCCGTTCAAGAAGCAACAAGACGGT
AATCCACCAATAACGATGCGTTTCGATGCGAGAGCGTTGGAAGATAACGAGCCCTCTGTT
ATTTTCACTGTTTGGGCAAATTCAACTTCAAAAGCATTACATCCGGAAAAGAAACCGGCA
CAGGTAGCAGCTCTGGTCATCAAAAACGCTGAATTGCAAATTAAAGGCGCCGCACGACCG
GAGCAAGTGTTCTACGGCGGCGAGGTGAAGGGAGAATCTGCCATGACTTACTTTGATGAT
ATCGGCACGAGAGTCGTGCACACATATCAGATATTCAATGAAGGTCCCTGGCGAGTGTCT
TTGGTACAGGTTGTGATATCATGGCCTCATCAGGTTGCATCCGAAAACTCGCAGGGGAAA
TGGTTGCTGTATCCCGAAGATATTCCAACTGTTGATGGAGAAGCAGGTCAAAGTAATGGA
AACTGTTTTATATCGGGTAACGAGATCAATCCCCTAAAACTTACATCACGACCGGGTGGG
ACTGAGCCATATCTGGAGAACCTTGAAATGGATCCCTTCTTAAGTTCTGGCAAACTCAGC
GTCAGTTCCAGCGAAAAAAGTCACAACTTCACTAAAGTCCAGAATCAAATTTTCGGTTAT
TCTACCGGTGCTTCGAAAAATGTAAGAAGAAAAAGACAAAGCGATATTGTTAAGGCCGAA
GCTTACACTGACAAGGATGGACAAAGGAAACACGTTGTAAATATGAACTGTCAAAAGAAG
AGCGCGAAATGCATACAGTTTCAATGCGTTATATACCGCTTGGGTCGCATGCAGGCGACC
ACGATCACAGTCCGAGCTCGTCTCTGGAACAGCACGCTGGTGGAGGACTACCCTCGGGTC
AGTCACGTCAACATCGCCTCCACCGCCTACATACACATACCAGACAATAACATACACCAG
AACAAGATACACGATGACGTCGCTACTGTGGAAACAGTTGCCTATCCTGATTTGAAGATC
AGTGAACCTTCGGAAGTGCCTTTATGGGTGATCATAGTGTCTGTAATAGTTGGTTTAATA
GTTCTAATTCTTCTCATAATTGCTTTATGGAAACTTGGTTTCTTCAAGAGAAGTCGTCCG
GATCCAACACTGTCCGGTAACTTAGAAAAGAATAATCACGAGTCCAGCCCTTTCATTGGT
CGAGACAGAACCAGTATTCGATAG
Protein sequence:
MKRRRTSHYPNEGKIDRRDVGAIPFLIMNPLLLVGAPLGQNLQPNTTKSGALWRCRVNSA
PSDCEQIVTDGKRSLDSFHLTGPHPDEIKDGQWLGVSVRSQGAGKKAVVCAHRYIRKSGE
SQFGQGLCYTLSNDLQLIDMWEPCRGRSVQREHEEFGFCQVGTSSSLLEDDTLVLGSPGP
YTWRGTIFTQDTNDDLLERDNVVYMAPVEDGASPVEKYSYLGMSVSGANFFGPEASYAAG
APRAHGTGQVVLFSKRVIYDWTRNDVNILNFTLVLNGEQFGSSFGYEVASADVNGDGLPD
LLVGAPFYFSRDAGGAVYVYLNEKHNLPQDYSLKLTGKPESQFGIAIANTGDLNRDGCED
VAIGSPYEGNGVVYIHMGDRKLGLKAKPDQVIRAESLPTVMRTFGYSLSGGMDLDENGYP
DLLVGAYENSSIALIRTKPIIDIKTSIKPSNTIINIDPSVQGCTKDPNSNYTCFTFQACC
IIKSLVRSTQSNSHELNYVIEAETFPGGRKYSRVFFDSEKSIIINKTIHLGKDVEDCREH
VVYLKNNTRDIQTPIKFQVTYKIVQIQPKYSTIGELPRIDDYPVLNATATSSFSANFLND
CGLDGVCVSDLVVEPVLQLPKTEDGKSYALTLGQEEEIKLSISVDNYGESAYEAQLFVQH
HASLHYIAANITGKHMICTSVNKTTVSCLLENPFKKQQDGNPPITMRFDARALEDNEPSV
IFTVWANSTSKALHPEKKPAQVAALVIKNAELQIKGAARPEQVFYGGEVKGESAMTYFDD
IGTRVVHTYQIFNEGPWRVSLVQVVISWPHQVASENSQGKWLLYPEDIPTVDGEAGQSNG
NCFISGNEINPLKLTSRPGGTEPYLENLEMDPFLSSGKLSVSSSEKSHNFTKVQNQIFGY
STGASKNVRRKRQSDIVKAEAYTDKDGQRKHVVNMNCQKKSAKCIQFQCVIYRLGRMQAT
TITVRARLWNSTLVEDYPRVSHVNIASTAYIHIPDNNIHQNKIHDDVATVETVAYPDLKI
SEPSEVPLWVIIVSVIVGLIVLILLIIALWKLGFFKRSRPDPTLSGNLEKNNHESSPFIG
RDRTSIR