| New model in OGS2.0 | DPOGS208625 |
|---|---|
| Genomic Position | scaffold1183:- 22797-23210 |
| See gene structure | |
| CDS Length | 414 |
| Paired RNAseq reads | 111 |
| Single RNAseq reads | 1152 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004630 (2e-28) |
| Best Drosophila hit | lethal (2) essential for life, isoform A (3e-19) |
| Best Human hit | alpha-crystallin B chain (2e-18) |
| Best NR hit (blastp) | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (5e-27) |
| Best NR hit (blastx) | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (9e-27) |
| GeneOntology terms | GO:0042803 protein homodimerization activity |
| InterPro families | IPR008978 HSP20-like chaperone IPR002068 Heat shock protein Hsp20 IPR001436 Alpha crystallin/Heat shock protein |
| Orthology group | ND |
Nucleotide sequence:
ATGTCACTATGGGCAAGTACTAAACCAATATTTGGAGATGAAATTGTTTTACGTTCGATC
GATTGGTTGGAGAATTTTCCTTGGAGAAACGAGACAACAGTTAAAACTGAGAAAGATAAG
TATGAAATTCGATTGCATTTAAAAAGTTTTACGCCTGAAGAGATAAGTGTTAAAATACAA
GATGGTTTTATAGTTATTGAAGGCAAACACGACGAGAAACAGGACGAAGAAGGTTTTATA
TCTCGACATTTTGTGAGACGATACGCGATACCCGAAGATTGTCGAATCGAGGCGATACAA
TCTAGAATGTCCTCTGAAGGAATACTTGTTATCAGTGCTCCAAGGAAACCTGTTGTTCGG
CGGGACACTGTGATACCCGTCTCACACGAGGGCAACATTAAATCTAAATTGTAA
Protein sequence:
MSLWASTKPIFGDEIVLRSIDWLENFPWRNETTVKTEKDKYEIRLHLKSFTPEEISVKIQ
DGFIVIEGKHDEKQDEEGFISRHFVRRYAIPEDCRIEAIQSRMSSEGILVISAPRKPVVR
RDTVIPVSHEGNIKSKL