Genomic Position | scaffold1750:+ 4741-20711 |
---|---|
See gene structure | |
CDS Length | 3540 |
Paired RNAseq reads   | 1241 |
Single RNAseq reads   | 3599 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009471 (7e-109) |
Best Drosophila hit   | graf, isoform F (3e-114) |
Best Human hit | rho GTPase-activating protein 26 isoform b (3e-104) |
Best NR hit (blastp)   | PREDICTED: similar to Graf CG8948-PA, isoform A [Apis mellifera] (3e-165) |
Best NR hit (blastx)   | PREDICTED: similar to CG8948-PA [Nasonia vitripennis] (3e-138) |
GeneOntology terms    | GO:0005100 Rho GTPase activator activity GO:0005622 intracellular GO:0007165 signal transduction |
InterPro families    | IPR008936 Rho GTPase activation protein IPR013606 IRSp53/MIM homology domain (IMD) IPR000198 Rho GTPase-activating protein domain IPR004148 BAR IPR000477 Reverse transcriptase |
Orthology group | MCL10495 |
Nucleotide sequence:
ATGGGCGTGGGCCTGCAACCGCTGGAGTTCACCGAGTGCCTGGCAGACAGCCCGCACTTC
CGAGAGAACCTACAGCGTCATGAGAAGGAGCTGGAGCGGACCAGCCAGCAGATCAAACGT
CTCATCAAGGAGGTCAAGGATGTCGTGCAAGCCGCCAAACGTCTGGGTGCGGCTCAGCTG
GCTTTGGCGGCCAGTATGGAGCAGTTCGAGTTCGCGTGCATCGGAGCCTCTATGACTGAA
GATGAGAGGGTCATCGGAAGATCCTTGCATCACTTCGCTAACCTCATCAGAACTATAGAG
GATGAAAGAGATAGAATGCTGGGTCGAGCACACGAGCAAATTATACAGCCTCTGGAGAAG
TTCAGGAAGGAACATATTGGTGCTGTTAAGGAAGGCAAGAAGAAGTTTGACAAAAAGACT
GCAAAATTCTGTCAGAGTCAAGAGCGCACTTTGTCGCTATCAACCAAAAAACCAGAAGCT
GTCTTCCAAGAAGCCGATGCGGCGATGGATATGGCGGAGCGCGACTTCTGCCAGGCGTCC
CTGGAGTACGTGTTCCAGTTGCAGGCCGTCCAGGAGAGGAAGAAGTTCGAGCTGGTCGAG
ACGCTGCTGGGGTTCGTGTTCGGCTGGTGGACCTTCCATCACACGGCGCATGACGTGCAC
GCTGACGCCGAGCCGCTCGTCAGAGACCTGCAGCTCCGGATACAGAGGACGAGAAGTAAC
TTTGAAGAGACCAGCAAACAGACGGAGTCGCTGATGAAAAAGATGATGGAGGTCAGGCAG
ATGTTTAAATTTTGTTACAGTCGCACAAAGAAGACGATCCTGATGGAGAAAAAGGCGTTC
GGTACTACCTGGAGCAAACAGTACTGCACATATGAGAAGATGACGAGCACACTCACACTG
ATGCCATACAACCAGATTAATGTAAAGACGGCTGGTCCCGTGGAGAGTGTGGTGGTGGTG
GGAGCGCGGCCCGTCACGGATGCCGAGAGGAGGTTCTGCTGGGAGGCTCTGGTGGAGGAG
AAGCCTCCGCTGGCGCTGCAGGCCGCCGCCGACCGGGAGCGCGCCGCCTGGATCAGGACG
CTCAGGCGGGCCGGCGCCCCGCACACGGACACGCCCGCGCCCAGGGCCAGCGACGGCGAG
CTCTGGCCGCTCGACGACGCCGGCTTCGAGTTCGTCAGGAGGCTGGCGACTGAGCTTGAG
GCCCGGGGGCTCGACGACCAGGGACTGTACCGGGTGGCCGGCGTGTCGTCCAAGGTGTCT
CGTCTGGTGTCCCTGGGTCGCTCGGGGCGCTTGCCCCCGTCGCTGGAGTCGTTCGAGTCC
CGCACGCTCACCTCCGCCCTCAAGAGCTACCTCCGAGCGCTGCCCGACCCTCTGCTCACG
CGACGCCTCCACGACGACTTCCTCGCCGCCGCCAAATGCGAGCGTTCCTCGGAGCGCGTG
TCCCGCCTGTACTCGCTGGTGCGCGCGCTGCCGCCCGCCAACCGCGCCATGCTGCAGCTG
GTGCTGGCCCACCTGGAGCGCGTGGCGGCCAGGAGTGACGTCAACCTGATGACGTCATCC
AACCTCGCCGTGTGCTTCGGGCCGACGCTGTTGAGAGCGGAGCGGGAAACCGTGGCCTCC
ATACTGGAGCTGAAGTTCTACAACGTGCTGGTGGAGGCGCTGCTCGACAATATATCCGCG
GTGTTCGCGCCTCTCCCGCCCGCCGCTGTGCCGCCCGCTGAAAACCACAACGGTATCGCT
GGCAACGAGAAAAAATGGGGGTATCGGTTCAAGTTTAATAATAAATACACGGAATCCATT
TTAGCCTTCGCTGACGATCTCGCAATACTGACACGTAACCCCAAACACTGTCAAGTACTA
TTAGATGAAGTGGATAGATTCTGTGAGTGGACCGATGGATTGAGGACAAAACCAAGTAAA
TGTCACTGTCTGTGTCTCGGTAGGCGGAGTACAAGATACACCTCATACGATCCGGGATTA
TCGTTAGGCGGTCAATGCATTTCTACGGTTACAGAAAATGCACCATTTAAATTTCTCGGT
CGGAAGATTGATAATATAGGTCGTACTCCATCTTTAGAAGGTATAGTAGATAGCTTTTTA
AACGATCTCAACAAGGTAGATAGCCAACAGATCAGTAACGTTAAAAAAGCTTGGATCTAC
GATAATTACCTAACTTCACGTTTAAATTGGCCTTTCCTCGTTTATGATTTCAATAAAACC
CTTCTGTCAAAGTTAGATGCAGGCGTCATAAAGATGTTGAAGTTGTGGCTCGGGCTCGCG
CTAACGGCTGATTCATCGGCTTTATTTAGGGATCGCAATAGTTTTGGGATGAGTCTAAAA
AGGCCATCGGAGCTCTACAAACACCTGAGAGTTTCCAAGAGATACATCCTGGGGAAATCC
CAGGATGACGTCGTTACATCGCTCCCAAAAGACAAAGATGCCCCAGAGCTAGAGTCAAGG
CTTCAATTCCACAAGCAGTTTATGATAGGAGCGCAAAGTAACAGAGTAGGGTTAGGATCA
AGTAGGAAGGTCCAAGATACGGATATATTGAAGTCTTTTATTCGACAAGACGAGAATGAT
AAATATAAGATCCATGCAATAAGTTTAGAAATGCAGAACGAGTGGTTAGACATAGGAGAT
TTTTGCATCCCATTAGCACTAAAATGGCGCACCTTAATCCATGATTGGTCGCCAGCATTG
CTAAAATTCTATCTCAATGCATTCCAGATGACTCTCCCAGATCAGAGTAATTTAGTAAGA
TGGGGTAAAGGTACCGAAAAGACTTGCTATATCTGTGGGAAGGCAGTTGGAACTGCTAGG
CACTTGTTAGTGGGATGTAAGGTACTCCTCGATAGCGGTCAATACTCGCGTCGTCACGAT
AGGGTTCTAGAAATCATACGTGAAGCGGTTAGTCTTTCGGTAGCCAGAGCGCAAAAAGGA
ATAACCACAAACGAGCGATCAGTAGGTTTTGTGAGAGAGGGCACTAGGGCTATAAAAACA
AATGTTAAGCCTTACTCCATCCTTAAAGCGGCTACGGATTGGACTATAATGATGGATACG
TGTGAAAAACAATACAAAATCCCCGAGGATATTTGTGCGTCGGCCTCCAGACCGGACATA
TTCATGTATTCGCGAATCTTAAAGCGCGTTGTGATGATAGAGCTTACGGTTCCTTGGGAA
ACCAACATCCCCAAAGACCATACCATCAAGGTCAACAAATATTACGAGCTCACAAACGAA
CTCACTCGAAATAGGTTCGTCGTGGAATTATACGCGGTAGAAGTGGGAGCGAGAGGTATA
ACGACTAAATTTCTCTACAACCTACTAAAAGACTTGGGCCTGTCCAGAACTCACATGAAT
TCATTCTTGGAACGTATTTCAATGGCAGCCCTAATAGTTTCTTTTCAAGTTTGGTTGGGT
AGGGAGAGGAGCTTGGACAGTGGAGGTGAGCGTTTAACGCGCGTTAGTTATGGGCCCTTA
AACCTACACCTAGGTCGCAAGTCCCAGGTGCTGTTGAAGCTCCTCTCCCTGCAACGATGA
Protein sequence:
MGVGLQPLEFTECLADSPHFRENLQRHEKELERTSQQIKRLIKEVKDVVQAAKRLGAAQL
ALAASMEQFEFACIGASMTEDERVIGRSLHHFANLIRTIEDERDRMLGRAHEQIIQPLEK
FRKEHIGAVKEGKKKFDKKTAKFCQSQERTLSLSTKKPEAVFQEADAAMDMAERDFCQAS
LEYVFQLQAVQERKKFELVETLLGFVFGWWTFHHTAHDVHADAEPLVRDLQLRIQRTRSN
FEETSKQTESLMKKMMEVRQMFKFCYSRTKKTILMEKKAFGTTWSKQYCTYEKMTSTLTL
MPYNQINVKTAGPVESVVVVGARPVTDAERRFCWEALVEEKPPLALQAAADRERAAWIRT
LRRAGAPHTDTPAPRASDGELWPLDDAGFEFVRRLATELEARGLDDQGLYRVAGVSSKVS
RLVSLGRSGRLPPSLESFESRTLTSALKSYLRALPDPLLTRRLHDDFLAAAKCERSSERV
SRLYSLVRALPPANRAMLQLVLAHLERVAARSDVNLMTSSNLAVCFGPTLLRAERETVAS
ILELKFYNVLVEALLDNISAVFAPLPPAAVPPAENHNGIAGNEKKWGYRFKFNNKYTESI
LAFADDLAILTRNPKHCQVLLDEVDRFCEWTDGLRTKPSKCHCLCLGRRSTRYTSYDPGL
SLGGQCISTVTENAPFKFLGRKIDNIGRTPSLEGIVDSFLNDLNKVDSQQISNVKKAWIY
DNYLTSRLNWPFLVYDFNKTLLSKLDAGVIKMLKLWLGLALTADSSALFRDRNSFGMSLK
RPSELYKHLRVSKRYILGKSQDDVVTSLPKDKDAPELESRLQFHKQFMIGAQSNRVGLGS
SRKVQDTDILKSFIRQDENDKYKIHAISLEMQNEWLDIGDFCIPLALKWRTLIHDWSPAL
LKFYLNAFQMTLPDQSNLVRWGKGTEKTCYICGKAVGTARHLLVGCKVLLDSGQYSRRHD
RVLEIIREAVSLSVARAQKGITTNERSVGFVREGTRAIKTNVKPYSILKAATDWTIMMDT
CEKQYKIPEDICASASRPDIFMYSRILKRVVMIELTVPWETNIPKDHTIKVNKYYELTNE
LTRNRFVVELYAVEVGARGITTKFLYNLLKDLGLSRTHMNSFLERISMAALIVSFQVWLG
RERSLDSGGERLTRVSYGPLNLHLGRKSQVLLKLLSLQR