| Genomic Position | scaffold11141:+ 1431-3973 |
|---|---|
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 57 |
| Single RNAseq reads | 7966 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (6e-51) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (5e-65) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGAAGTTCAAAGTCACGAGAAACATAATTGTACCCGGAGCCATGAAACGCAACAATCTT
GTACTAGTTCTAATAGCAGTGTTTTTCTTTATTATATCGTATACATCTTGTTATCAGATA
TTACTTGATAGTCCCGAAACGCCACTGTGTCGGTCCGACTTCAGAAACGGATCGAGGGCG
ATTCCCTTAAAAAGAAGCGTAAGACAGGGAGACGTCATATCTCCGAAACTATTCACGGCC
GCTTTGGAAGACGCCTTCAAGTTTCTGGAATGGGAAGGACTGGGGATCAATATTAACGGC
GAATACATTACTCACCTTCGGTTTGCCGACGATATCGTAGTCATGGTAAAATCGATGGAT
GAACTTAGTACGATGCTCGAAAGCCTCAATCGAGGCTCCCAACGGCTAGGTCTTAAAATG
AACATGGACAAGACGAAACTCATGTCTAATGTCCATGTCACACCTACCCGTGTTATGGTT
GAGAACTCGGTACTTGAAGTTGTTGACGCGTATGTATACCTGGGACAGACAGTCCAGTTA
GGAAGGTCCAACTTCGAGAAAGGTCAATCGCCAAAACCAGCTCGGATGGGCAGCTTTCGG
GAAGCTCCTGATGACGTACGAATCCGAAACGTGGTGCTTCATCAAAGGGCTTATGAACAG
ACTCAGAGTCGCTCAGAGCTATGGAGAGAGCTATGCTCGGAGTTTTTCTACGGGATCGAA
TCCGAAATGATGAGATACGTAGAAGTACGAGAGTCACCGACATAG
Protein sequence:
MKFKVTRNIIVPGAMKRNNLVLVLIAVFFFIISYTSCYQILLDSPETPLCRSDFRNGSRA
IPLKRSVRQGDVISPKLFTAALEDAFKFLEWEGLGININGEYITHLRFADDIVVMVKSMD
ELSTMLESLNRGSQRLGLKMNMDKTKLMSNVHVTPTRVMVENSVLEVVDAYVYLGQTVQL
GRSNFEKGQSPKPARMGSFREAPDDVRIRNVVLHQRAYEQTQSRSELWRELCSEFFYGIE
SEMMRYVEVRESPT