| New model in OGS2.0 | DPOGS208517 |
|---|---|
| Genomic Position | scaffold724:+ 145723-150439 |
| See gene structure | |
| CDS Length | 1659 |
| Paired RNAseq reads | 302 |
| Single RNAseq reads | 704 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008453 (1e-23) |
| Best Drosophila hit | CG11247, isoform C (1e-22) |
| Best Human hit | zinc finger protein 236 (3e-24) |
| Best NR hit (blastp) | LOC100005466 protein [Danio rerio] (1e-30) |
| Best NR hit (blastx) | LOC100005466 protein [Danio rerio] (7e-33) |
| GeneOntology terms | GO:0005634 nucleus GO:0046872 metal ion binding GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL40278 |
Nucleotide sequence:
ATGAAGGTGGCTTGCCATTTTAAGAAGACTTGTAGAAATTCCGATAAAAAAATTAAAAAG
TATTCAGCCATCAAAGAAAGTGGAGATTATATAGATATTTATGATTTTCTTAAAGACAAT
GACGATCCAATAAAATTACGGCTACCATTAAATTTGGGTAAAAGTCCATCACCATACAGA
AGAGATGAAGACAATGAATCAACATGTACAAGCATCCAGAACTTCATGACCGACATCCTT
CAAGAGCTGCCAGATTCCGAAGCTAACATCATCAAACAGGTTATTGAAGAAGAGGCTGAC
ATACTCGAAGATTCACTCGACTCACACTGGCTAGAAGACCTGTCGGATAATGAGCTCGGA
ATGGATTTCAGTTTCAGCCCGTTTTCAACCCCGAGGACACTTCAGAATGACAAAGACGAT
GACATTTCGACTTCAAAGACATTGAATAATAATGAAGAAATCAAAATAAATAAAACACAT
GAATGCAGCTTAGATAATATTATAACTAGGAGCATGGACATTGATCTGGAATCACTGGAC
AAAAGAATTAACTGCGAGGCTGGGAATAATGTATGTGTGATTGATATTAACATAGAGAAC
GCTTTGAAAAACACAGCAGAGAAGGTTATGTTAGACGATCTACTATCAACACCTCCAGTT
TTACCGAACGTGACATCACCGGCTACTCCACTTATAAAGAATATTCTGTTTGGGGATATG
GAAGAAACATCACGTTATAATGATGAACCACTAACAAGAACGACAGAAATCAAAGAAAAT
ATTGAAGTTATAGATGAATTTTTATACAAAAATGTATTAAATGATGTAAATACAGAAGAC
GGTTATAATGATATTAATGAAATAGAGAGATATTTGACTAAACCAGAAATAAAAAGGAAA
AATTTAGAAGATATACCATCAGCAAAAAATAAATATTGCATAACAAATTTTTATTGTAAA
ATGTGTGATAGGAAATTTAAGAATTTGGTCGCTTTGAAAGTCCACTGTGCTAAATATCAC
AAGCTTAGGATTCCAAAAGATAATGTTGCCAGGATAAGAAAAAAAATGATTTGTGATTAT
TGCGGGAAAATATTTAATTCGCCAAGATGTATAATCAAGCATATTGAAAATCATAAGAAT
CCTGTGTCATATGAATGTAAAAGATGTTCGCTGAAATTTGATACAAAGTCGAAGTTGAGA
CTTCATCAAGGCACTCACGAGCATAATGCCAACAACAATAATGTTATAAAGAATCACGTG
TGTTCAATATGCGGCTGGGCGTGCACAAGTTCATCGAATTACAACATACATATCAAGAGA
CATTTCAATATATACATGCATACTTGCGAGGAGTGCGGACAGGGTTTCTACAGGAAATGT
GATATGAATGCACATATGAGACGTCACACAGGCGAGCGTCCGTTCCAATGTTCGTATTGT
TCTAGAAGTTTCGCTAGACACGACGCACTCAACAGGCACATTAAGCGACACACGGACGAA
AGGCCGTATCCATGTAACTTTTGTAAATCAACATTCACTAACGCTTACGATCTTAGACAC
CACAAAGAAAATGCGAAGTCTTGTTTGAAAATTCAAATGTTGTTAGCGAAGAAGAGTAAT
GTTGCCAGTGATATAGTATTAACAACAAATGTTACCTGA
Protein sequence:
MKVACHFKKTCRNSDKKIKKYSAIKESGDYIDIYDFLKDNDDPIKLRLPLNLGKSPSPYR
RDEDNESTCTSIQNFMTDILQELPDSEANIIKQVIEEEADILEDSLDSHWLEDLSDNELG
MDFSFSPFSTPRTLQNDKDDDISTSKTLNNNEEIKINKTHECSLDNIITRSMDIDLESLD
KRINCEAGNNVCVIDINIENALKNTAEKVMLDDLLSTPPVLPNVTSPATPLIKNILFGDM
EETSRYNDEPLTRTTEIKENIEVIDEFLYKNVLNDVNTEDGYNDINEIERYLTKPEIKRK
NLEDIPSAKNKYCITNFYCKMCDRKFKNLVALKVHCAKYHKLRIPKDNVARIRKKMICDY
CGKIFNSPRCIIKHIENHKNPVSYECKRCSLKFDTKSKLRLHQGTHEHNANNNNVIKNHV
CSICGWACTSSSNYNIHIKRHFNIYMHTCEECGQGFYRKCDMNAHMRRHTGERPFQCSYC
SRSFARHDALNRHIKRHTDERPYPCNFCKSTFTNAYDLRHHKENAKSCLKIQMLLAKKSN
VASDIVLTTNVT