| Genomic Position | scaffold20:+ 336347-338588 |
|---|---|
| See gene structure | |
| CDS Length | 1518 |
| Paired RNAseq reads | 82 |
| Single RNAseq reads | 301 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012290 (2e-21) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (1e-32) |
| Best NR hit (blastx) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (1e-31) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding |
| InterPro families | IPR005135 Endonuclease/exonuclease/phosphatase |
| Orthology group | ND |
Nucleotide sequence:
ATGTTTGAACCTCCGGGGGATACCCCCCCGGACGATCGTGGGGCCTGTAGACCTCCACCC
CCTAAAAGACACTATTCCGGAGACGAGGTTTCGCGGAACAATACCAGCGAGGACAGTGAT
AAGTATTATAAACCATATTATAAACAAGGATACACACGTGTATTCCCTGAGAGTACCAGC
AAAGGTGAGTACTCTGTTTTTGTAGAAAGTACTAAAGACACCAAACTTGGGAACCAAAAT
CCAATAACACTTGGCAGCTTATTCAAAAACGAAGTCAAGGGCGTGAAAAATATCAAACGA
GTCAATGCAAATAAAGTGAGCGTATTGTTTGAACAAACAATAAATGCCAATGCGTTTCTT
AAAAATTCCGACTTTCATACTAAAAACGATTTTAAAGTTTACATACCAGCTAGGGCCGTG
GAAACAATAGGAGTGGTAAGATTTGTTCCCACAAGCATATCTAATGAAGAACTGTTTAAA
AAACTCTCCTCTTCACATGAAATTATTGGTGTCAGGCGTTTTATGAAAAGGGTGAACGGT
GAAAGAAAACCATTAGAAAAGGATATAGATATATGTTTATTGAACGAAACTTGGCTGAAG
GATGGAAATAGATTTAGGATTCCCAACTACAATATGATAAATCAGAATGGTGTTAATGGA
CGCGGAGGAGTTGCCATACTAATTAAAAATACATTTAAATACCAAATAGTACCCACAAAT
TTTTATAATTTCTTACAATCTGTGGCAATAGTTTTAAAAACAGACTTTGGTGAATTATCG
ATTCTCTGTGCATATAGCCCTCCTCGAGGAAGTAGATTTAAGTGTAGGAGACTGAAGCAA
ATAATCGATGATTTACCAACGCCAATGTTACTAGCAGGTGATTTGAATGCTCATCATGTA
GCATTTGGATGTCGCTCCACTAACTCGAGAGGCAATGATGTATACAATTTATTAGATGAA
TGTAACTTATGTATTCTTAATACAGGGGCTTACACTACTGTAGGGAATATATCCCATAAC
CAGTCAGCCATAGACATTGCTTGCGTCACTCCATCTATAGCCCCTTTCTGCCATTGGAGA
GTACATGACGACCCAATGGGCAGCTACCACTATCCCACTATTTGTGACATTTACCTAAAT
GCAGAAAAATATGAAGTTAATAATCCCTCTGACCGTTATTTGTACAAAAAAGCAAACTGG
ACTTTGTTCAATTCTGAAACAGGAAAAGCTTTTAAAGAATTTTCCATTAACACTTCAGAT
CCGCTTTCGTGCTATGATAAATTTATTAGCATTTTAAATATCATTAAAGATAAATGTATA
CCAAAAGCCACTCGCATATCTCAATACATTAACAAAAAACCAGTTCCATGGTGGGACAAT
GAATGCGCAGATGCTGTAAAGAAAAGTAAAGATGCACTTAATTATTACAGACTGCTGCCT
AGTACAGAAAACTTTATAAAATATAAAAGATTGGATGCTATTAAGAAAAAACTACTGAGG
CAAAAGAAAAAAGAATAG
Protein sequence:
MFEPPGDTPPDDRGACRPPPPKRHYSGDEVSRNNTSEDSDKYYKPYYKQGYTRVFPESTS
KGEYSVFVESTKDTKLGNQNPITLGSLFKNEVKGVKNIKRVNANKVSVLFEQTINANAFL
KNSDFHTKNDFKVYIPARAVETIGVVRFVPTSISNEELFKKLSSSHEIIGVRRFMKRVNG
ERKPLEKDIDICLLNETWLKDGNRFRIPNYNMINQNGVNGRGGVAILIKNTFKYQIVPTN
FYNFLQSVAIVLKTDFGELSILCAYSPPRGSRFKCRRLKQIIDDLPTPMLLAGDLNAHHV
AFGCRSTNSRGNDVYNLLDECNLCILNTGAYTTVGNISHNQSAIDIACVTPSIAPFCHWR
VHDDPMGSYHYPTICDIYLNAEKYEVNNPSDRYLYKKANWTLFNSETGKAFKEFSINTSD
PLSCYDKFISILNIIKDKCIPKATRISQYINKKPVPWWDNECADAVKKSKDALNYYRLLP
STENFIKYKRLDAIKKKLLRQKKKE