| New model in OGS2.0 | DPOGS200383 |
|---|---|
| Genomic Position | scaffold339:+ 46158-56209 |
| See gene structure | |
| CDS Length | 1482 |
| Paired RNAseq reads | 303 |
| Single RNAseq reads | 829 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007240 (0.0) |
| Best Drosophila hit | CG6927 (7e-117) |
| Best Human hit | glycine receptor subunit alpha-2 isoform A precursor (5e-47) |
| Best NR hit (blastp) | neurotransmitter gated ion channel [Aedes aegypti] (3e-157) |
| Best NR hit (blastx) | neurotransmitter gated ion channel [Aedes aegypti] (6e-142) |
| GeneOntology terms | GO:0016935 glycine-gated chloride channel complex GO:0016934 extracellular-glycine-gated chloride channel activity GO:0045211 postsynaptic membrane GO:0006811 ion transport |
| InterPro families | IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR006201 Neurotransmitter-gated ion-channel IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR006028 Gamma-aminobutyric acid A receptor |
| Orthology group | MCL15107 |
Nucleotide sequence:
ATGAACATGAAAACTCTTTTGTATAGTGCGTTATTTATTATAATAAAAAGTGCCACAGGA
CAGAAGTCGCCAAATGCCCCACTGGATTGCCCGTCTTTGGAGAAGGGAGACATTTATACA
CAGTCCGAATTCCTATCGCGCTTGGCTAACGAATGCCGCTACGATAGACTGCTTCTACCA
ACCTACAAGACCGGTGAAGTTGTTTATGTTCATGCCAGCGCATACGTCTACTTTATACAA
CCAGCTGAAGCACACGACTTGAATTTCAAACTGCACTTCTTACTGCAATTGCGATGGACT
GACGCGAGACTCGCCTATTCGTTGTATTCGCCAGAACGACAGAAAATTATAGGTGAAAGT
GACCTTCGCCAGAGAATATGGGTACCGCATCTGTACATGTCCAATGAACAATCCTCCAGT
CTCATGGGGACTGATAGCAAAGACGTGCTCATTTCCATAGCACCAGATGGCGAAGTCTTG
TTCAGCCGACGGATGCAAGCTGTGCTGTATTGTTGGATGAACCTTCAAAAATTCCCGTTT
GACGACCAAAGATGTTCGATGAATTTAGAAAGTTGGAAATACAACGCTTCAATCTTGCGT
CTTATGTGGGAGAAGGATAATCCCGTCCGTCTTTCTAGCGAATTGCATCTCACTGAATAT
TCGCTCCTTGATTATTGGACAAACGAATCAGTAGTTCGAGGCGATATAGTTAATATGAGG
CAGGGGGGAGCTGGAAATTACAGCGCGCTTAAATTCACGTTTAAGCTCGGTCGTGAAGTC
GGTTACTACCTTATGGATTATTTCATACCATCTATGATGATAGTGGCCATGTCATGGGTT
ACATTTTGGTTGCAGGCTGATGCCTCCGCTCCAAGAATTACATTGGGTACCAGCACTATG
TTATCATTCATCACTCTGGCGTCATCACAAGCGAAGACGTTGCCGAAGGTCTCCTATATT
AAGGCCAGTGAGATTTGGTTCTTGGGCTGTATTGGTTTCATCTTCTCGGCGCTGGTGGAA
TTCGCATTTGTTAATACTATTTGGCGAAGAAAGAAAGTGGTGAGTCTCAAGAAGGTTAAC
AGCAAGTATATCTTGAAGAGTACTCTCACACCTCGGCTGGCTCGTAAGGAGCTGCAGAAG
GAAATGCAATCCTCTCCTCAGCTGAGCAAGTCTCGGTCATGTTCATCCCTACATCAAGAT
GCCTCCAGCGATCCCAACGGGCCCGGATACAACAACTATCTGACCGTACATAGCTTCCCA
TCAGCGCTGAACTTGCCAACGATAACGACACAGAGCTATGACGATCTAACTGGGGGTAGG
GGCCGCCCCGGCAGCGAGGGGTCCGACGAGCCCAAACACACTTGGACACAGATGACCCCG
CAGGAGATAGCCACGTGGATAGACAAGCGATCACGGGTCTTATTCCCGTTACTCTTTATC
CTATTCAATATAATTTACTGGACCTTCGTCTATTGTCTATGA
Protein sequence:
MNMKTLLYSALFIIIKSATGQKSPNAPLDCPSLEKGDIYTQSEFLSRLANECRYDRLLLP
TYKTGEVVYVHASAYVYFIQPAEAHDLNFKLHFLLQLRWTDARLAYSLYSPERQKIIGES
DLRQRIWVPHLYMSNEQSSSLMGTDSKDVLISIAPDGEVLFSRRMQAVLYCWMNLQKFPF
DDQRCSMNLESWKYNASILRLMWEKDNPVRLSSELHLTEYSLLDYWTNESVVRGDIVNMR
QGGAGNYSALKFTFKLGREVGYYLMDYFIPSMMIVAMSWVTFWLQADASAPRITLGTSTM
LSFITLASSQAKTLPKVSYIKASEIWFLGCIGFIFSALVEFAFVNTIWRRKKVVSLKKVN
SKYILKSTLTPRLARKELQKEMQSSPQLSKSRSCSSLHQDASSDPNGPGYNNYLTVHSFP
SALNLPTITTQSYDDLTGGRGRPGSEGSDEPKHTWTQMTPQEIATWIDKRSRVLFPLLFI
LFNIIYWTFVYCL