| New model in OGS2.0 | DPOGS210562 |
|---|---|
| Genomic Position | scaffold733:+ 41870-44565 |
| See gene structure | |
| CDS Length | 1539 |
| Paired RNAseq reads | 1295 |
| Single RNAseq reads | 3282 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013454 (0.0) |
| Best Drosophila hit | CG5451 (0.0) |
| Best Human hit | WD40 repeat-containing protein SMU1 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG5451-PA isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG5451-PA isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR006594 LisH dimerisation motif IPR006595 CTLH, C-terminal LisH motif IPR019775 WD40 repeat, conserved site IPR020472 G-protein beta WD-40 repeat IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL14904 |
Nucleotide sequence:
ATGTCTATCGAAATTGAATCTGCAGATGTTATCCGTCTGATACAACAATACTTGAAGGAG
TCTAACCTCACAAAAACTTTGCAAACGTTACAGGAGGAGACAGGGGTTTCATTGAACACA
GTTGATAGTGTTGATGGATTTTGTGCCGACATAAATAATGGTCACTGGGATACCGTGTTA
AAAGCAACAGCATCATTAAAGCTGCCTGATAAGAAACTTATGGATTTATATGAACAAGTG
GTCTTGGAACTCATTGAGTTACGTGAGCTGGGTGCCGCTCGAACATTGTTGCGCCAAACC
CAGCCCTGCTTGCTCATGAAGCAACAGGAGACGGATAGATACATGCATCTTGAAAATATG
TTGGCTCGATCATATTTCGATCCTCGGGAAGCATACGGAGCTGGTGGTGGCAAGGAGTGG
CGACGCTCGGCGCTGGCCGCAGCACTGGCGGGTGAGGTCTCCGTGGTTCCATCTTCACGT
CTCCTAGCGCTGCTGGGTCAGGCGCTGAAGTGGCAGCAGCATCAGGGTCTACTGCCGCCA
GGAACCACCATTGATTTGTTCAGAGGCAAAGCTGCTATTAGGGACGAAGAAGATGACCAA
TACCCGACACAAGTGTCAAAGATTATAAAATTTGGCCAAAAATCTCATGTTGAGTGTGCA
AAGTTTTCCCCCGACGGCCAGTACTTGGTGACGGGGTCCGTGGACGGGCTGGTGGAAGTG
TGGAACTTCACGACGGGCAAGATCCGCAAGGATCTGCGGTACCAGGCGCTCGAAGAGTAC
ATGAGCATGGAGGAAGCCGTGCTCAGCCTGGCCTTCGCGAGAGACTCCGACACGCTGGCG
GCCGGAGCCAACGATGGCCGCGTCAAGGTGTGGAGGGTCGCCAGCGGACAGGTGCAGCGC
AAGTTGGAGCGAGCCCACGCCAAGGGAGTCACGTGTCTGCAGTTCGCCAGAGACAATACT
CAGATACTGTCCGCCTCCTTCGACCGAACCATCAGGATCCACGGATTGAAGTCGGGAAAG
ATTTTAAAAGAATTTCGAGGTCATACGTCGTTCGTGAACGAGGCTGTGTTCACCCCGGAT
GGACACAGCGTGCTAAGCGCTTCCTCCGACGGCACGGTCAAGGTGTGGTCGGTGCGCTCC
GGGGAGTGTACGGCGACGTTGAAGCCGCTGGGGTCTGGGGAGCCGCCCGTCAACTCGCTG
CTGCTGATGCCCAAGAACCCGGATCACTTCGTGGTGTGTAACAGGACCAACACCGTGGTC
ATCATGAACATGCAGGGACAGATCGTGCGCTCCTTCACCAGCGGCCGGCGCGAGGAGGAA
GGCGGTGCCCTGGTGTGCGCGGCGCTCGGAGCGCGTGGCCGCCTCGTGTACTGCGCCGCC
GAGGACCTCGTGCTGTACGCCTTCTGCGCCGCCAGCGGCAAACTCGAGAGGACCATCAAT
ATCCACGAGAAGGCGGTCATCGGTATGACGCACCACCCTCACCAGAACCTGCTGGCCACC
TACAGCGAGGACGGACTCCTGAAGTTGTGGAAGCCGTGA
Protein sequence:
MSIEIESADVIRLIQQYLKESNLTKTLQTLQEETGVSLNTVDSVDGFCADINNGHWDTVL
KATASLKLPDKKLMDLYEQVVLELIELRELGAARTLLRQTQPCLLMKQQETDRYMHLENM
LARSYFDPREAYGAGGGKEWRRSALAAALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIRDEEDDQYPTQVSKIIKFGQKSHVECAKFSPDGQYLVTGSVDGLVEV
WNFTTGKIRKDLRYQALEEYMSMEEAVLSLAFARDSDTLAAGANDGRVKVWRVASGQVQR
KLERAHAKGVTCLQFARDNTQILSASFDRTIRIHGLKSGKILKEFRGHTSFVNEAVFTPD
GHSVLSASSDGTVKVWSVRSGECTATLKPLGSGEPPVNSLLLMPKNPDHFVVCNRTNTVV
IMNMQGQIVRSFTSGRREEEGGALVCAALGARGRLVYCAAEDLVLYAFCAASGKLERTIN
IHEKAVIGMTHHPHQNLLATYSEDGLLKLWKP