| New model in OGS2.0 | DPOGS210491 |
|---|---|
| Genomic Position | scaffold296:- 59642-63545 |
| See gene structure | |
| CDS Length | 975 |
| Paired RNAseq reads | 143 |
| Single RNAseq reads | 593 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012582 (4e-124) |
| Best Drosophila hit | cleavage and polyadenylation specificity factor 73 (9e-146) |
| Best Human hit | cleavage and polyadenylation specificity factor subunit 3 (2e-141) |
| Best NR hit (blastp) | PREDICTED: similar to CG7698-PA [Apis mellifera] (9e-162) |
| Best NR hit (blastx) | PREDICTED: similar to CG7698-PA [Apis mellifera] (1e-154) |
| GeneOntology terms | GO:0006379 mRNA cleavage GO:0005847 mRNA cleavage and polyadenylation specificity factor complex GO:0006378 mRNA polyadenylation GO:0016787 hydrolase activity GO:0006398 histone mRNA 3'-end processing |
| InterPro families | IPR001279 Beta-lactamase-like IPR022712 Beta-Casp domain |
| Orthology group | MCL15609 |
Nucleotide sequence:
ATGACTACTAACCCCAGAAGAGGCACCGATCCCGTGCCAATGGAAGAAAGTGATCAACTC
ACTATAAGACCATTGGGAGCTGGTCAAGAAGTGGGCAGATCCTGCATCATGTTAGAATTT
AAAGGAAAGAAAATAATGTTGGATTGTGGAATCCACCCCGGCCTGTCGGGGATGGACGCT
TTACCATTTGTGGATCTCATAGAAGCTGATGAAGTGGATCTCTTGTTGATATCACATTTC
CACCTGGACCACAGCGGGGCGCTGCCCTGGTTCCTCACCAAGACCTCGTTCAAGGGCCGC
GTGTTCATGACGCACGCCACTAAGGCGATCTACCGCTGGCTTGTCTCGGATTATATTAAA
GTTAGCAACATATCCACGGAGCAGATGTTGTACACGGAGTCCGACCTGGAGGGGTCCATG
GATCGTATAGAGACCATCAACTTCCACGAGGAGAAGGACGTGAGGGGCGTGAGGTTCTGG
GCGTACAACGCGGGCCACGTGCTGGGGGCGGCCATGTTCATGATAGAGATCGCCGGAGTC
AAGGTGCTGTACACGGGCGACTTCTCGCGGCAGGAGGACAGACATCTGATGGCCGCGGAG
ATCCCCACCGTACACCCGGACGTGCTGATAACGAAGAGAGAGGAGCGAGAGAGTCGCTTC
ACCACGCTGGTGAGCGACGTGGTGGGCCGCGGGGGGAGGTGCCTCATACCCGTGTTCGCG
CTGGGCAGGGCGCAGGAGCTGCTGCTAATACTGGACGAGTACTGGTCGCTGCACCCGGAG
CTGCAGGACATCCCCATATACTACGCGTCTTCTCTCGCCAAGAAGTGCATGGCGGTGTAC
CAGACCTACGTCAACGCCATGAACGACCGCATCCGGAGACAGATCGCCGTCAACAACCCC
TTCGTCTTCAGGCACATATCTAATCTGAAGGTGGGTGCGGAGGCTCCGCGAATTACAAAC
ACGCTGTCCTGCTAG
Protein sequence:
MTTNPRRGTDPVPMEESDQLTIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLIEADEVDLLLISHFHLDHSGALPWFLTKTSFKGRVFMTHATKAIYRWLVSDYIK
VSNISTEQMLYTESDLEGSMDRIETINFHEEKDVRGVRFWAYNAGHVLGAAMFMIEIAGV
KVLYTGDFSRQEDRHLMAAEIPTVHPDVLITKREERESRFTTLVSDVVGRGGRCLIPVFA
LGRAQELLLILDEYWSLHPELQDIPIYYASSLAKKCMAVYQTYVNAMNDRIRRQIAVNNP
FVFRHISNLKVGAEAPRITNTLSC