| New model in OGS2.0 | DPOGS209519 |
|---|---|
| Genomic Position | scaffold2111:- 1327-6064 |
| See gene structure | |
| CDS Length | 1305 |
| Paired RNAseq reads | 5321 |
| Single RNAseq reads | 12203 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007332 (0.0) |
| Best Drosophila hit | Rpt1 (0.0) |
| Best Human hit | 26S protease regulatory subunit 7 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to Rpt1 CG1341-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Rpt1 CG1341-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0008540 proteasome regulatory particle, base subcomplex GO:0016887 ATPase activity GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0004175 endopeptidase activity GO:0005524 ATP binding GO:0005737 cytoplasm GO:0030163 protein catabolic process GO:0009987 cellular process GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR005937 26S proteasome subunit P45 IPR003959 ATPase, AAA-type, core IPR003960 ATPase, AAA-type, conserved site IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL14869 |
Nucleotide sequence:
ATGCCTGATCACCTAGGAGATGATATGCGAAAAGTAAAAGATGACAAGGAAGAGCCAGAA
AAAGAGATTAAATCCCTTGATGAAGGAGACATAGCATTATTAAAGTCTTATGGCCAGGGA
CAGTATATGAAGATTATCAAAGAGGTGGAAGAGGGGATACAGACTGTAATGAAGAGAGTT
AATGAGCTAACTGGAATAAAGGAATCTGACACTGGTCTAGCTCCACCTGCCCTGTGGGAT
CTTGCTGCAGATAAACAAACTCTTCAGAATGAACAACCCTTACAGGTTGCAAGATGTACA
AAAATCATTAATGCAGATTCAAATGATCCCAAATACATAATAAATGTGAAGCAATTTGCT
AAGTTTGTTGTGGACCTGGCTGACTCGGTGGCTCCTACTGATATTGAAGAAGGAATGAGA
GTCGGAGTCGATCGTAACAAATATCAGATCCACATACCCTTACCACCCAAAATAGACCCA
ACTGTGACTATGATGCAAGTGGAAGAAAAGCCTGATGTTACATACAGTGATGTCGGAGGC
TGTAAGGAGCAGATTGAAAAGTTAAGAGAGGTCGTTGAAACACCACTGTTACATCCAGAG
AAATTCGTGAAGCTCGGTATTGAGCCACCCAAGGGAGTGCTGTTGTTCGGACCCCCCGGT
ACTGGCAAGACGTTGTGTGCGAGGGCCGTGGCCAACAGGACAGATGCTTGCTTCATAAGA
GTCATCGGTTCGGAGCTAGTTCAGAAGTATGTTGGTGAAGGTGCTCGTATGGTGAGGGAG
TTGTTTGAGATGGCGAGGAGTAAGAAAGCCTGTTTGATATTCTTTGATGAGATTGACGCC
ATCGGAGGTGCCAGGTTCGATGATGGAGCCGGTGGTGATAATGAAGTGCAGAGGACTATG
CTAGAGCTGATCAACCAATTGGATGGGTTCGATCCACGAGGAAACATCAAGGTGTTAATG
GCGACCAATCGTCCGGATACCCTGGACCCCGCCCTCATGCGTCCCGGACGGCTAGACCGG
AAGGTGGAGTTCGGTCTGCCGGAGCTGGAGGGGCGAGCTCACATCTTCCGCATACACGCC
AGATCCATGAGCGTCGAGAGGGACATACGATTCGACCTACTCGCCAGGCTCTGTCCCAAC
TCCACCGGCGCTGAGATCAGGTCTGTGTGTACCGAGGCCGGTATGTTCGCGATCCGCGCT
CGTCGGAAGGTCGCCACCGAGAAGGACTTCCTGGAGGCTGTTAACAAGGTCATCAAGTCG
TACGCGAAGTTCTCAGCGACGCCGCGCTACATGACCTACAATTAA
Protein sequence:
MPDHLGDDMRKVKDDKEEPEKEIKSLDEGDIALLKSYGQGQYMKIIKEVEEGIQTVMKRV
NELTGIKESDTGLAPPALWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFA
KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG
CKEQIEKLREVVETPLLHPEKFVKLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR
VIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM
LELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPELEGRAHIFRIHA
RSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKS
YAKFSATPRYMTYN