| New model in OGS2.0 | DPOGS202409 |
|---|---|
| Genomic Position | scaffold1305:+ 19223-24741 |
| See gene structure | |
| CDS Length | 1869 |
| Paired RNAseq reads | 2131 |
| Single RNAseq reads | 5342 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003304 (1e-08) |
| Best Drosophila hit | dally-like, isoform A (2e-60) |
| Best Human hit | glypican-6 precursor (9e-49) |
| Best NR hit (blastp) | glypican [Aedes aegypti] (4e-97) |
| Best NR hit (blastx) | glypican [Culex quinquefasciatus] (1e-77) |
| GeneOntology terms | GO:0043395 heparan sulfate proteoglycan binding GO:0016020 membrane GO:0005578 proteinaceous extracellular matrix GO:0031225 anchored to membrane |
| InterPro families | IPR001863 Glypican |
| Orthology group | MCL10895 |
Nucleotide sequence:
ATGTTCAAACGAACGTACGGCATGATCTACGAACAGCACTCGTATGTCTTCGAACAACTC
TTTGAACAGTTGGAGAGGTACTACACACGAGGAGACAGCGACTTCGACGAGATGATGGAC
AGCTTCTTTGGGATCCTGTATCAGAAAATGTTCGCCGTTCTGAACTCACAGTATACCTTT
GATGACAAGTATCTGAAATGTGTGAACGAGCACATGCGGGACATCCAGCCATTCGAGGAC
GTGCCATCAAAACTATCAGCGCAGCTGAGACGAGCGTTCGTCGCCACACGCACCTTCCAC
AAGGCGCTGCGTGCTGGAGCTGATGTTGTCAGGAATATGATGCAGGTGGGTGTAACCCAG
GAGTGTGTTGCCGCATGGGCTCGTCTTCGTTACTGTGGCTCCTGCGCGGGTCACCAGGTC
CCGGCCTGTAGTCGCTACTGTCACAACGTCATCCGCGGCTGTCTGCCTACACACGCAGAC
CTCGGAGACCAGTGGGATGCCTATGTTGATGCCGTCGAGAAGGTAGCAGATCGCCTACTC
GGACCGTTCAACATAGCAATGGTCGTGGAACCGATTGACATTAAAATATCCGAAGCCATC
ATGAGCTTCCAGGAACGTAACCAGGAGATCTCGCAGAAAATCTTCTCTGGTTGCGGGAAA
CCGGTTTTGGGGGGTGGCGGCAGCACGGGGCCGTTCTTCCCCCCGGGCAGGAACAAACGT
TTCGCCCGATCGATACCCGACTTCGATTGGAATCATAAACCTAATGATGTGGACGATTTT
GAAATCGAGGCATCCTTTGAGAGTGTTTTCAACGACGACCCGTCGCTCATGAGCCTCCGG
ACGCCCGAGGGCATTCGCAAAGCGACGGAGGAAATGGCAGAGAATGCTAAGTCGAGGGAG
CGTTTCCTCCAATACATGAGAGGACAGATTCAACTCGAAGAGTACGAGGAACACGAGCGG
AGCAAACGTGATGCGGACCCTGAACCGGCGGCGCAAGGCGGTTCAGAAATAGACTACAAG
TCGTACGAGTTTGAAGGCAAGCGAGGCTCCAAGAAGAAGAAGCTGACGGCGGCCAAGGCT
GAAACCGGGCACGGTGCGGACACTGGTCCCGAGTTAGAGAAGTTGGTCCGCGAGACTCGT
TCCCGTGTCCGAGCTTCCCGTCGCTACTGGCTCCACCTGCCGGCGCTTCTGTGTGCCACC
GCCAGTGTTACCACCGCGCCCTGCTACAACGGCAGTCACGTGGCCAGCTACACGTCGATA
GCAGCTGGTGACGGCTCCGCGGCGCTGGCCTCCAACCCGGAGGTGCGGTCCCCACCACCA
CCACCCCCGCCCGCGAGCGACGCGTCACCGCTGGAGGCTCTCCGCTCACTCACCGGAAGG
CTCAAGGATGCTTACAACGGAGTCGAAGTGCACTGGATGGATACAGCCGAAGACCTGCAA
TCTGCGGCCGCGTCTCAGAGCGAGTTCATAGACAATGGCGGATCAGGGTCCGGCTCCGGA
GACGACACGGACGACACAGAGGATCTGCCCGACGACGACGAGGACAGAGACCCCAGCAAG
GACTATGAAGGCTCCGGCATCAGCGAGTCGCCGCTGGACCCAACCGACACGGAGACAGAG
AAACAACAGCCGACCGAGACCGAGGAGCCGGTGGTGCCGAGCGTAGTGAACGTGCCGGGC
ACCAAGAACGTCAACCTGCCCTCCGCCATAGACGCCGGCGACGACGCCGTGGACGTCCGC
GGCCGCGTGGACGAGCCGCAGCCCGCGGCGGCCGGCGCCGAGCGACCCTCGCTGCAGAAC
GCGCTGTTCACGTACGCGCTGCCCGTCGTCTGCGCCTGGTTCGGCTCCATCGTCACCGAC
CTGTTTTGA
Protein sequence:
MFKRTYGMIYEQHSYVFEQLFEQLERYYTRGDSDFDEMMDSFFGILYQKMFAVLNSQYTF
DDKYLKCVNEHMRDIQPFEDVPSKLSAQLRRAFVATRTFHKALRAGADVVRNMMQVGVTQ
ECVAAWARLRYCGSCAGHQVPACSRYCHNVIRGCLPTHADLGDQWDAYVDAVEKVADRLL
GPFNIAMVVEPIDIKISEAIMSFQERNQEISQKIFSGCGKPVLGGGGSTGPFFPPGRNKR
FARSIPDFDWNHKPNDVDDFEIEASFESVFNDDPSLMSLRTPEGIRKATEEMAENAKSRE
RFLQYMRGQIQLEEYEEHERSKRDADPEPAAQGGSEIDYKSYEFEGKRGSKKKKLTAAKA
ETGHGADTGPELEKLVRETRSRVRASRRYWLHLPALLCATASVTTAPCYNGSHVASYTSI
AAGDGSAALASNPEVRSPPPPPPPASDASPLEALRSLTGRLKDAYNGVEVHWMDTAEDLQ
SAAASQSEFIDNGGSGSGSGDDTDDTEDLPDDDEDRDPSKDYEGSGISESPLDPTDTETE
KQQPTETEEPVVPSVVNVPGTKNVNLPSAIDAGDDAVDVRGRVDEPQPAAAGAERPSLQN
ALFTYALPVVCAWFGSIVTDLF