| New model in OGS2.0 | DPOGS210707 |
|---|---|
| Genomic Position | scaffold673:- 15498-66606 |
| See gene structure | |
| CDS Length | 1416 |
| Paired RNAseq reads | 431 |
| Single RNAseq reads | 1392 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006317 (0.0) |
| Best Drosophila hit | twin, isoform C (2e-168) |
| Best Human hit | CCR4-NOT transcription complex subunit 6 (2e-129) |
| Best NR hit (blastp) | PREDICTED: similar to GA16037-PA [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA16037-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0030014 CCR4-NOT complex GO:0030528 transcription regulator activity GO:0005737 cytoplasm GO:0005515 protein binding GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening GO:0048477 oogenesis |
| InterPro families | IPR005135 Endonuclease/exonuclease/phosphatase |
| Orthology group | MCL10914 |
Nucleotide sequence:
ATGACTTGCCGCGATCAGGATTATTTACTCGCAGTGTACCGTCAGCATGCGATGCCGTTA
GACGAGACTTCTCAGCATTCCATTTATTTACCGTGCGGGTGTCGGGTCAGTCGCATTGCA
AGTAGAGGAGCTTTAGATAAGCTTGGAACTTGCGACCCAGGTGTAAGTTTAAGGGACCCG
TATCTAATGCCACCGTTCACCTCCACTATCCAAGCTCCCCTCTCTACCTTGCCCAATTTG
AATCGAACCTACTATGGCTCCCTTCGAATTACTGCCACACTCCCACCACAGAGGCCTTGG
ATCCCACTTACGAGACCCAACAGGACTCGTCCGACATGTATATTTACGGTGATGTGCTAC
AATGTACTCTGCGACAAATATGCAACAAGACAGATGTATGGCTACTGTCCTAGCTGGGCT
CTCGAGTGGGACTATCGGAAGAAGGGCATCCTTGATGAAATAAGACACTACTCCGCGGAC
ATCATAAGCTTACAGGAAGTTGAAACGGATCAGTTCTATAACTTCTTTCTACCGGAACTG
AAACAAGACGGTTATGATGGCATCTTCTCTCCGAAATCCCGAGCGAAGACGATGTCCGAG
TCGGAAAGAAAATACGTCGACGGTTGTGCGATATTCTTTAGATCTGCTAAATTCTCACTA
GTAAAGGAACACCTTATAGAATTCAATCAGCTAGCGATGGCTAACAGCGAGGGTTCAGAC
AATATGTTAAATCGAGTCATGCCGAAAGATAATATAGGTTTAGCCGCTCTGCTGAAAACT
AAAGAAGCTGCTTGGGAAAACGGCGTACCAACGGATTCGTCAACATTAGCACAACCGATA
CTAGTTTGTACGGCACACATCCACTGGGATCCGGAGTTCTGTGACGTGAAACTGATCCAG
ACGATGATGTTGAGCAACGAACTGAAAAGTATTATGGAGGATTCGGCAAGGACACTCCGC
CTCAGCGGACAGAAAGACAACGTGCAACTGTTGCTTTGCGGTGATTTTAATTCGTTGCCG
GATAGCGGTGTAGTAGAGTTTCTGTCTGCTGGGCGTGTGTCATCTGAGCACCGAGATTTC
AAGGAGCTCGGGTACGCGTCATCTCTCCGTCGTATGCCGGGCTCGGAACACGAGTTCACG
CACAACTTTAAATTAGCCTCCGCATACAGCGAAGATATCATGCCCTATACTAATTACACG
TTCGACTTCAAGGGTATCATCGACTACATATTCTACAGCAAGCAGTCGATGACGCCGCTG
GGTCTGTTGGGGCCGCTGTCTCAAGACTGGTTCAGGGAGCACAAGGTGGTGGGCTGTCCA
CACCCACACATACCATCAGATCATTTCCCACTGTTGGTAGAGTTAGAGATGTACCCGCCA
TCCGCCAGCAGCAACGGACTGATCGGGCGCAGGTAG
Protein sequence:
MTCRDQDYLLAVYRQHAMPLDETSQHSIYLPCGCRVSRIASRGALDKLGTCDPGVSLRDP
YLMPPFTSTIQAPLSTLPNLNRTYYGSLRITATLPPQRPWIPLTRPNRTRPTCIFTVMCY
NVLCDKYATRQMYGYCPSWALEWDYRKKGILDEIRHYSADIISLQEVETDQFYNFFLPEL
KQDGYDGIFSPKSRAKTMSESERKYVDGCAIFFRSAKFSLVKEHLIEFNQLAMANSEGSD
NMLNRVMPKDNIGLAALLKTKEAAWENGVPTDSSTLAQPILVCTAHIHWDPEFCDVKLIQ
TMMLSNELKSIMEDSARTLRLSGQKDNVQLLLCGDFNSLPDSGVVEFLSAGRVSSEHRDF
KELGYASSLRRMPGSEHEFTHNFKLASAYSEDIMPYTNYTFDFKGIIDYIFYSKQSMTPL
GLLGPLSQDWFREHKVVGCPHPHIPSDHFPLLVELEMYPPSASSNGLIGRR