| New model in OGS2.0 | DPOGS214122 |
|---|---|
| Genomic Position | scaffold2603:- 5957-11705 |
| See gene structure | |
| CDS Length | 3369 |
| Paired RNAseq reads | 8960 |
| Single RNAseq reads | 21691 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006171 (3e-24) |
| Best Drosophila hit | CG42389, isoform G (5e-106) |
| Best Human hit | fibronectin type-III domain-containing protein 3A isoform 2 (1e-99) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010469 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010469 [Tribolium castaneum] (6e-171) |
| GeneOntology terms | GO:0031410 cytoplasmic vesicle GO:0012506 vesicle membrane GO:0001669 acrosomal vesicle GO:0016020 membrane GO:0016021 integral to membrane GO:0000139 Golgi membrane GO:0060009 Sertoli cell development GO:0042598 vesicular fraction GO:0009566 fertilization GO:0007286 spermatid development GO:0016337 cell-cell adhesion GO:0005829 cytosol GO:0005794 Golgi apparatus |
| InterPro families | IPR003961 Fibronectin, type III IPR008957 Fibronectin type III domain IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL13142 |
Nucleotide sequence:
ATGGTAGGCGTGGGCGTAGCGGAGGGCGGCGGGGACGGCTACTACGGCGAGTACTACCCC
CCTGAGCAGTACTACATGCCGGAGATGTGCCCTCACCCTCAGCACCCACAGCATGCGCAT
ATGGCGTGCACTGTTCACGCTGAGTATGGTGGAATGCCGGTGGTAACGTCAGCAACAATG
ATGCCGCCTCTTTTACCACCGGTGATGGACGAGAATATGAGACATTACCTGGTGCCGCAT
CCTCATGCACAGCCGCACCCACACCACGCGGCGCACCACCAGCCGCCGCACCACCAACCA
CCCCATCACCAACCGCCCCCTCATCATCAACCACCGCATCATTTTGGACCAACAAATGGT
GCTGCGGGTCCCCAACACTTTTATGGAGGTGGCTATCCGACTCACTTCCATCACGTTCCA
CCCCACCACATGCAGCACTCACCACCACCTCCGGTATACCACAAGGATGAACGAACTCAG
CGGCAATACTCTAAACTCAAACAAAAGCTGGAACGCAAACACGTTAATAGGAATAATGGA
ATAGAAGTAAATTCTGGTGCGAGCACGCCGTCATTATCACCAAGGAAAGAGTCAAATGGT
CGCGGTGGTAGTGGGAGTGGTGGAGCGTCGTCTGGCGCTTGGTCTGAGGGCGAGGGGTCA
TCAGCTGGCGCCTCAATCCAGGGTGATGATGAGAATGATACACAGGCACTGCTAGATCTT
GTGTCTGCTACCCGAACACCGCAAGTTAGTGACGTGACTCCAACAAGTGCTCTCGTGCAA
TGGAATTCCCCTCTACCAGAAGGTGTCACTCTCCCAAATGTGGACCTCACTTACGACCTC
CTGCTTGGAGACCGGGGACGGTATAAAGCTATATACAGTGGTTCATCGCTATCGTGTCGC
GTAAGAGACTTGAGACCCGGATGCGAATACTCAGTGTGTCTGCAAATCCGTGCGGGTGAG
TTGACGGGTGCGGCGAGTGAAGCGGCCACATTCCGCGCTCCACCGGCCCCGCCCGAACGA
CTGCCGGCGGCGCGCGTTACACAGAGAGCACGAACATCGCTGTTGTTACGCTGGCCCTCC
GCCACCGACAACGGAGCGCGAGTCACACACTACCTGCTGGAGATGGACGCCGGGGAGGGC
TTCGTGGAGCTCACCAGGCCCCGCACGAGACAACACACCGTCAATAATTTGCAACCTCAG
ACGCGTTACCGATTCCGGATCGCGGCCGTCAACGAGTGCGGCCGCGGGGAATGGAGTGAA
GAGACCGTTGTTTGGACTACGGGGTCTCCGCCGCCTGCTCCCGGCCCACCGACGCTGGTT
ACCGCCTCGCCGACGTCATTAACCCTGACGTGGCAACGCCGGGCGGAGGAGGAGTTCGTC
CTGCAGATGGACGATGTATCACGAGGACACGGATTCCTACCCGTTTACAGCGGGTCGGAC
TGCACTTACGTGTGTGACGGACTCAGGCGAGCGACCGATTATAGATTTCGTTTGAGGAGC
GAAACCGTCGACGGTCAAGGACCGTGGTCTGTGGAGGTCACCTACACCACGCCGCCCGAG
CGACCCTGTCCGCCGAGCAGACCCACACCCCGCGGGAAGATACACTCTCGCGCGATACGG
TTGAGGTGGGATCCTCCCACCGATAACGGCGGAGCCGCCGTGGACACTTACACTTTAGAA
ATTGACGGTGGAGAGGGTTACAGCCTCGCTTATCAAGGACCCGAACGTGAGGCCCACTGT
GATCGCCTCCTACCAGGAACACAGTACCACGCGCGAGTCAGATGCTCGAACGTGGCAGGC
ATGAGCGACTGGTCAGCTAGCGAGACAGTTACCACAGAGGCGACCTGTCCCAGCGCGTGT
CCCGCGCCGGAGACCAGCGGAGCCAGCCGCGCCACGCAAGCCACCGTGCGTTGGAAGGCG
CCCGAATGCACTGGAGGGTCTCCACTTACAGAATATCGCCTCGAACTGGCTGATACTGAC
GGTCTGGTACGTTTAGTACACGTGGGCCCTGAATCTGAATGTGTCGTTCGGGATTTACTT
CCCGGCCGAGAATACCGAGCGTGGGTGACAGCATGCAATAGGGTCGGTGCCGGGCCTCCA
TCCCCAGCTTTGAGGTTCACCACACAGCCCGCACCTCCCGACGCGCCCGAACCTCCTGTC
GTTCATATAGAGAGCCCCCGGACGGCTCTGGTCGAGTGGACCGCTCCCGCTAACAATGGC
GCTCCTATTATCGATTTCCGTCTCGAAATGAGTGCGAACAACGTAGACTGCGCCTTCGCC
GAGGTATATCGCGGACTGGACACCGTCTGTTCGATAGGGAAACTGACTCCTTTCACGCCC
TACTTCTTTAGGGTGAGAGCTACGAATTCGGCCGGAAGAGGCCCGCGCTCGGCGGCCAGC
ACCGCTCTCACTCCTCGTGCTGTTCCCGCGGCGCCCACGGGGCTTCGACACGAAGCAACC
TGTGATTCTCTGAAACTACACTGGCGAGTACCGGCAAATCACGGAGCGGACATTCTTAAA
TATCGCGTGGAAGTAGACGACACCGCCTTCGATACAGATGGACCCATTCCAGAGAGGCTC
GTGGAGGGACTCGAGCCAGACACCGTGTATCGAGTGAGAGTGGCGGCGGTCAACGAACTT
GGACCCGGAGATTGGTCGGAAGAGGCGCTCGCCTCTACCCGACCGCGACCACCAGCGCCG
CCCGTAGTGAAGTTCGCTCAGGCCGCGCACAATCACCTCCGACTGGAGTGGGCCGGTCGG
GAGGGGACACAGTACTGCGTGGAGATGCGCGCGCCTGACGCCCGGGAGTTCCGTCCGGTG
TACCGCGGTTACGCACATTCCTGTAAGGTGAAGAAGTTGCGCGAAGCGACGACCTACACG
TTCCGGATACGAGCCAGCGACGAGCGGGGCGGGCGCGGCGTGTGGTCGTCGCCGCTGACC
GCTCGCACTGCGTCCGCGCCCCCCGCCGCGCCCTCCGCACCCACCGTCACGCTGGTGACA
CCGCGGGCCGCGCTCGTCGCTTGGGACCCGGTCGACGACGCCGACTACGTGCTGCAGAGC
GCGCGCGGCAAGGACGCTGTCTTTAAAGAGGTTTACACAGGCGACGCGTCGCAGTTCCAA
ATGGAGGAGTTGGAGTACGGCGTGGAGTACCAGGTGCGGGTGTGCGCGACCCGCGGCGGG
CTGTCCAGCTCGTGGTCGCCGTGCTCTAAGGTGGTGGTGCCACCGCCGGTGTCGGGTCGG
CCGCGTCGTGTCCGTCCGTCCCGGCCGCTGTCCGCGAGTCACGCGGCGCTGATGATGGCG
GCCGGCTTCTTGCTGGTGGCGGTCTTGGTGGCTGTCTTCCTTCAGAGCCTGGTGGAGCCT
CGCCCGTGA
Protein sequence:
MVGVGVAEGGGDGYYGEYYPPEQYYMPEMCPHPQHPQHAHMACTVHAEYGGMPVVTSATM
MPPLLPPVMDENMRHYLVPHPHAQPHPHHAAHHQPPHHQPPHHQPPPHHQPPHHFGPTNG
AAGPQHFYGGGYPTHFHHVPPHHMQHSPPPPVYHKDERTQRQYSKLKQKLERKHVNRNNG
IEVNSGASTPSLSPRKESNGRGGSGSGGASSGAWSEGEGSSAGASIQGDDENDTQALLDL
VSATRTPQVSDVTPTSALVQWNSPLPEGVTLPNVDLTYDLLLGDRGRYKAIYSGSSLSCR
VRDLRPGCEYSVCLQIRAGELTGAASEAATFRAPPAPPERLPAARVTQRARTSLLLRWPS
ATDNGARVTHYLLEMDAGEGFVELTRPRTRQHTVNNLQPQTRYRFRIAAVNECGRGEWSE
ETVVWTTGSPPPAPGPPTLVTASPTSLTLTWQRRAEEEFVLQMDDVSRGHGFLPVYSGSD
CTYVCDGLRRATDYRFRLRSETVDGQGPWSVEVTYTTPPERPCPPSRPTPRGKIHSRAIR
LRWDPPTDNGGAAVDTYTLEIDGGEGYSLAYQGPEREAHCDRLLPGTQYHARVRCSNVAG
MSDWSASETVTTEATCPSACPAPETSGASRATQATVRWKAPECTGGSPLTEYRLELADTD
GLVRLVHVGPESECVVRDLLPGREYRAWVTACNRVGAGPPSPALRFTTQPAPPDAPEPPV
VHIESPRTALVEWTAPANNGAPIIDFRLEMSANNVDCAFAEVYRGLDTVCSIGKLTPFTP
YFFRVRATNSAGRGPRSAASTALTPRAVPAAPTGLRHEATCDSLKLHWRVPANHGADILK
YRVEVDDTAFDTDGPIPERLVEGLEPDTVYRVRVAAVNELGPGDWSEEALASTRPRPPAP
PVVKFAQAAHNHLRLEWAGREGTQYCVEMRAPDAREFRPVYRGYAHSCKVKKLREATTYT
FRIRASDERGGRGVWSSPLTARTASAPPAAPSAPTVTLVTPRAALVAWDPVDDADYVLQS
ARGKDAVFKEVYTGDASQFQMEELEYGVEYQVRVCATRGGLSSSWSPCSKVVVPPPVSGR
PRRVRPSRPLSASHAALMMAAGFLLVAVLVAVFLQSLVEPRP