| New model in OGS2.0 | DPOGS210330 |
|---|---|
| Genomic Position | scaffold160:- 271504-274602 |
| See gene structure | |
| CDS Length | 1464 |
| Paired RNAseq reads | 142 |
| Single RNAseq reads | 395 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011967 (1e-93) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to predicted protein [Ciona intestinalis] (9e-65) |
| Best NR hit (blastx) | PREDICTED: similar to predicted protein [Ciona intestinalis] (4e-58) |
| GeneOntology terms | GO:0005975 carbohydrate metabolic process GO:0009045 xylose isomerase activity GO:0005783 endoplasmic reticulum GO:0005773 vacuole GO:0005886 plasma membrane |
| InterPro families | IPR013022 Xylose isomerase-like, TIM barrel domain IPR001998 Xylose isomerase |
| Orthology group | MCL40698 |
Nucleotide sequence:
ATGTCCCACGTCCAAGCCGGGAAAAGACAGAAAACTAGGGATGTAAGGGCTGAAAACATT
GACTACTTTCAAGGCATAGACAGAATAGAGTACAACAACATGGCCACTGTAACAGACACG
GCTTACTATCGCCATTACAACAGCGGAGAGAAAATACTGTCCAAAGATATGGAAGAATGG
CTTAAATATAGTGTATCCTTCACAGAATTTAAATATGACGGTTCAGATGCTCAAGGAAGA
CCTACTTTTAACCGGCAATGGGATGATCACACAAACACTATAGATAATTGCAAACGTTGT
ATCAGAGCTTTCTACGACTTCTGTACAAAGCTCGGAGTGAAGTACTGGACCGCGTTTGAT
AATGATCTAGTGCCACAAACAGACAACTGGGATGAAAACAAAAGTAATTGGGATGAAATC
ACTGATTATATAACGGAAATGGCGCAAAAAACACAGATCAAATTGTTATGGATGGCGCCC
GACTTGCATTCCCATCAGAGATATTCGTCAGGAGCTTTCACGAGTAACGAAGCGACAACT
TTCTTGCAAGCAGCCAGTCAGGTCAAGAAATGTCTGGAAGTGTCTCAGCGTCTGAACGCC
GAATGCTTCCTCCTCTGGCCGTACAGGGAGGGCTACGACGCTGTGTTCCAAACAGACGTC
GCCAGAGAGATCAAATTGTTCGCTAAACTTTTAAAGATAACAGCGGAATACAGGGACAGG
TTGAGTTATAAATGTCAGCTGCTGCTGATGCCGTACCCGAGCTTTGGTAAGAACTTCAGA
AGTACGGAGATATGGCGACCGAGATGTGACTTTGATAGCGATACACTGAATAGGTACATG
TGGGACGTGACCAGCTGCTTGTACTTCCTGAAGTTCCATAGTTTAGATCGCTATTATAAA
GTGTGCTCTCCTCCAGGACAACATGTCTATTTAGCTGGAGTTTACAACGCGTTCGGAGGA
GTGACAATGACTAATACATTCGATCCCTCGGACATTAAGACTATAACGCTCATGTTGAAA
TGTATTATTGATCAAGGTTCCGCCCCCCCGGGTGGGATATCCCTGCGAGTGTCGTGTCCC
CGCGGCGGTACCATCCGTGACCAGCTAGCGATGTACATTAATTATATCGACGAGTGCGCC
AGAGGACTCAGGGTCGCAGCCGCTGTGCTCGCAGAACAGGTGTTCGTGAAGCATGTACAG
CAACGTTACTCCTCATACTACAGCGGCTTCGGAGCTCGACTAGTGAGCGGAGACGTGTCT
ATGGAAGAGTGTAAGCATGTACAGCAACGTTACTCGTCATACTACAGCGGCTTCGGAGCT
CGACTCGTGAGTGGAGACGTGTCTATGGAAGAGTGTGAAGAATTATACAAGAAAAATCAA
GCGCAAACTGAAATACAAAGCGGGAGGCGCGGGAACTACGAATTGGTCTTCCAACGATAC
CTAGACGCGTGCGACCACGTGTGA
Protein sequence:
MSHVQAGKRQKTRDVRAENIDYFQGIDRIEYNNMATVTDTAYYRHYNSGEKILSKDMEEW
LKYSVSFTEFKYDGSDAQGRPTFNRQWDDHTNTIDNCKRCIRAFYDFCTKLGVKYWTAFD
NDLVPQTDNWDENKSNWDEITDYITEMAQKTQIKLLWMAPDLHSHQRYSSGAFTSNEATT
FLQAASQVKKCLEVSQRLNAECFLLWPYREGYDAVFQTDVAREIKLFAKLLKITAEYRDR
LSYKCQLLLMPYPSFGKNFRSTEIWRPRCDFDSDTLNRYMWDVTSCLYFLKFHSLDRYYK
VCSPPGQHVYLAGVYNAFGGVTMTNTFDPSDIKTITLMLKCIIDQGSAPPGGISLRVSCP
RGGTIRDQLAMYINYIDECARGLRVAAAVLAEQVFVKHVQQRYSSYYSGFGARLVSGDVS
MEECKHVQQRYSSYYSGFGARLVSGDVSMEECEELYKKNQAQTEIQSGRRGNYELVFQRY
LDACDHV