| New model in OGS2.0 | DPOGS206799 |
|---|---|
| Genomic Position | scaffold7:+ 1006576-1040587 |
| See gene structure | |
| CDS Length | 1245 |
| Paired RNAseq reads | 1562 |
| Single RNAseq reads | 4024 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000617 (2e-54) |
| Best Drosophila hit | syntaxin 7, isoform B (4e-20) |
| Best Human hit | syntaxin-7 (3e-25) |
| Best NR hit (blastp) | PREDICTED: similar to Pep12p, putative [Tribolium castaneum] (1e-54) |
| Best NR hit (blastx) | PREDICTED: similar to Pep12p, putative [Tribolium castaneum] (2e-41) |
| GeneOntology terms | GO:0006886 intracellular protein transport GO:0016020 membrane GO:0016192 vesicle-mediated transport GO:0005484 SNAP receptor activity GO:0005794 Golgi apparatus |
| InterPro families | IPR006011 Syntaxin, N-terminal IPR000727 Target SNARE coiled-coil domain IPR010989 t-SNARE IPR006012 Syntaxin/epimorphin, conserved site |
| Orthology group | MCL11994 |
Nucleotide sequence:
ATGATCGCAAATGACTTCCAGCAAAAGTACATTCGGGGTATGCTTAGGACATCACAATAC
AAGCTGCCCAATAGACGCCCTGACGACACATTCGTACATTTCCATACCTGGAAAGAAGTG
ACGGTTACAGTAGTCCATAGAGCAGCACATAATATTTTTCATCGTGTCGGCTTCACGGCA
CCATATAGTATATTAGAACAAATAGGCGAAGAAGCATGCAGAGTGCGCCTACTGCTGATT
GAGCAAGCGAGTGCGCTGAGAGCTACCGCGGGCCTACCTGGCGGCTTCGTGTGTGTTTCC
AAGATGAGGTCGCGGTTGCACATGTTATACGATTCACAACATTGTATCACCACCGATTCA
TTTCTAGTTTTCGTTGTGGAGCAACCGAAGGGGTGCTCGATGGGTATCAGTGCTTTCAGC
TCGATACAACTGCCGCGGGTGGAACCACCATACATCATGTTTAGCAAAATGGAGGCGTCA
TACCAGGGGGGAGTATCGTTTGAAGACAACGACAATTTTAAGCGTCTGTCATCGACGATC
GCAAGTAATATTAAAAAGATATCTCAGAATGTGTCCTCTATGTCAAAGATGGTCAACCAG
CTCCAGACACCGCAAGATTCTCAGGAGTTGCGGAATCAATTGCGCCAAATACAAAATTAC
ACCCAAAAGCTGGCAAAGGATACATCATCATTGATTATGGAGCTGATGAAGACTCCGACT
GACATTCCAGCTAATAAGCTTACAAGAGAGCGGCTGAGCGATGAGTACATGACCACACTC
AATGCATTCCAAGCCACCCAACGTTCAGCGGCTCAGAAGAGCAAGGATGATGTTCGTAAA
GTCAAAGCTCAAAATATTAACATCGGTGATCCGTTTGCTCTTGGAGGCGGAGAGGGCGTT
GAGCTCGGGGAGCGTGTCGTGCGACAGTCGCAGCTGTCCTCCAGTTCCGAGCGTGAGCTG
CAACAGTTGGAGGAACGCGAGAGGGACATACGACAGCTCGAGAACGATATAATGGACGTG
AACCAGATATTTAAAAACCTTGGATCCATGATCCACGAGCAAGGTGCTGTGGTCGAGTCT
ATAGAGTCGAACGTAGAGGATGCGGCCACTAACGTTGAGTCGGCCGCCCGCGAGCTCAGC
CAGGCTGCCACCTACAAGAACAAGATGCGCAAGAAGAAGGTGATCCTGTCAATGATCTTG
ATGGTCATCGTAGTGGTGACGCTGGTGCTGTTGCTGGGTCGCTGA
Protein sequence:
MIANDFQQKYIRGMLRTSQYKLPNRRPDDTFVHFHTWKEVTVTVVHRAAHNIFHRVGFTA
PYSILEQIGEEACRVRLLLIEQASALRATAGLPGGFVCVSKMRSRLHMLYDSQHCITTDS
FLVFVVEQPKGCSMGISAFSSIQLPRVEPPYIMFSKMEASYQGGVSFEDNDNFKRLSSTI
ASNIKKISQNVSSMSKMVNQLQTPQDSQELRNQLRQIQNYTQKLAKDTSSLIMELMKTPT
DIPANKLTRERLSDEYMTTLNAFQATQRSAAQKSKDDVRKVKAQNINIGDPFALGGGEGV
ELGERVVRQSQLSSSSERELQQLEERERDIRQLENDIMDVNQIFKNLGSMIHEQGAVVES
IESNVEDAATNVESAARELSQAATYKNKMRKKKVILSMILMVIVVVTLVLLLGR