| New model in OGS2.0 | DPOGS209738 |
|---|---|
| Genomic Position | scaffold756:+ 26487-37727 |
| See gene structure | |
| CDS Length | 3780 |
| Paired RNAseq reads | 2411 |
| Single RNAseq reads | 6125 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008926 (0.0) |
| Best Drosophila hit | CG9934, isoform B (0.0) |
| Best Human hit | ubiquitin conjugation factor E4 B isoform 2 (1e-172) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitination factor E4 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitination factor E4 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0000151 ubiquitin ligase complex GO:0034450 ubiquitin-ubiquitin ligase activity GO:0016567 protein ubiquitination GO:0005515 protein binding |
| InterPro families | IPR003613 U box domain IPR019474 Ubiquitin conjugation factor E4, core IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL14534 |
Nucleotide sequence:
ATGAGTGAACTTAGTCAAGAAGAGATTCGTAGACGGAGGTTGGCTCGACTCGCAGCCCTC
GGAGGGACGGGCTCTTCAGTTCCAACTAGTCCTCCCATTACACCTGGTGCATCAGTTCCA
CCAGACGTTCTTAGTCCAGGTCCACCGTCACGTTTGTCTCCAGCGTCAGTTCCACGTAGC
TCCACAGAAAATGCAGACAGTAAAAACAAAGAACAAAACTATGCAGAGAACAAAAGTGAT
GTGTCAGATCAAACAAAAATACCAGCTGATGGTCTAATTGTTACAGAAAAGCCAGATAAT
AATTTATTAGACGAAATGCCAGATACAAAAATGACAGACCTTTCTCAAACACGGCAGTAC
AATAGTTTTGACTCTATGGGAGAGGACACATTGTTAAGCTGTGGGTCAGTGAGAGTTCTG
CCTCAGTCTACTGTCAGTGGGTCAGAAGGTGCTTCGACAAGAGAAGATAGCACATCACGT
TCAATTTCTCCAGCACAGTTTGTAGAACCACCACCAGTTAGACCCAGAACACACAATGCT
TCACCAAGTTGCTCAAGACGCTCTCTTTCAATGGAAGTTGATGATGTTTCAGAGAGAAAT
TCACAGTCTGAACAAACACAAGAACCAATGGAGGTTGAAGATGACTCAACACAATCTCCT
GCTCGTAAAATTCAAAGATCTCGTACTGTAAGTTGCACAGAGTTAACAGAGGAACAGTTA
AGGAATATTGTTGCCAAAATATTACAAGTTTCATGGTCCGATGACAGCGCTGGTGGCATT
TTTGTGCCTTCAGTTGCGGCATCACTACTAGATAATCCCAAACTAGGTTTAGAGGAGATA
GCATCAGAGGCACTGATGGACACACTTTGTCAGATTATAGACGGAAACGATCCTCTGAAT
CAGAAGTTGATTGCTATAACGGAAACAACAAAAAGGCTGAGTGAAGACTGTGGTGATGGA
GATGATTTGTTGACGAGCGGACATCTCGGTTCTGAAGCGGATGCTAGCAAATCAGACTGC
CCTACACCATCGTTACCCATTCAGAAACCAATGCCCTCCCAAGGTTTAGCAGTCAGCTAC
ATACTGAAATTCTACAATAACATTAATCTGTATGAAAGGGACCATCCAAAGAAAAGCTCC
GAACCGCCTCTGAGTGATCTGTTGCAAAGTTTCCGAACGCTGCTCGTAAACAATCTAGTA
TTAGTGCTGAGGGGGAAATATGATTTGGAGAAATGTCGGAAATCGCCTCTGTTACCTTAC
CTCTTGATTGGGAACACTCCGATCGGACTGATACCTGAAGTTCTCTTAGCGACATATCAG
GATAAAGAAGCTTTCGAGGAGGTGTTCGTGCCGCTGCTTATGGGTGTTCGTGAAGAGATG
CGTCGATGTGTGTCCCCGCTGGTAGGTCGCGGGCACGGCGCACCGCTACGTGCTCTACGT
GCCCTGTGCGAGCTGCGCGCTCCCCCACGACACGCCGCACGGCCTGTGTGTGCGTTACTG
GCACGCCTACCCTCGTTATGCCCACCATCCGTTACCACAGCACCGGGGCGAGAAATCGCC
AGAGTCAGTTTCCTTGGACCCTTCTTTGCGATATCCCTATTCGCTGAGGAGAATCCCCGT
TTCGCTGAGAGGATGTTCGCGGGCACTGACCAGAGCCTGTCTTTCGCTCTGCAGCGTGAG
GTGGAAGCCAGTCGGAACACACTCCACAATATCTGTCACAACATACTGCTGTGTCCCGAC
GCAAGGGAACCATTCCTTAACTACTTCGCCACATTACTCCAGAGGAATGAGCGAAGAGCA
CAACTACAGACAGATGAACGTTCCCTGGCTGGCGACGGCTTCATGTTGAACGTTTGCTCG
GTTCTCCAACTACTGTCGGTGCGCATCAAGATGGACCGCGTGTACGAGCTGTATACCTTC
CAACCGGACACGTGGTACAACGTCAGGGATGAAACCCGCCTGTATTTCACAGCACAGGAG
GCACAGGAATGGCAGGACGCTCTCAACAACGATCCAAACCACGAATGGCCGGAAGCGAAG
TTTCAGACTGTGTGTTGGTTCCTGACTCTCCACATGCATCACGTGGCGCTCATACCCGCG
CTCCACACGCACCAGAGACGCATACGTGCCTTCCGAGATCTTCAGAAGGTGATTGAGGAG
CTGATGGCTGCTGAGCCTCAGTGGAGGAATAGCTTCTCAGCGTTCAGGAACAGGGAACTA
CTGCGACGATGGAGGAGACAGATCAAGAGGCTACACCGTTCCAAGCAGTGTGCGGAGACG
GCTCTCCTGGACCCCGAGCTGATGCGGCGTGGTGTTCAGTTCTACTCGTCCGTGTGTTCG
CTGTTGGTCCGTCAGCTGCAGTCGGCGGCGTCTACCGGCCCTAGCACACCGATCGCCTCA
CCATCACACGCCTTCCGCGCCCTACCCGAGTGGTATGTGGAAGACATCGCGGAGTTCATG
CTGTTCGCCGTCCAGTATGTGCCACAAACGGTGGCCTACCACATAGAAGACCCGATAGTA
ACCTGGCTTCTGAGCGCCATCTGTAACTCCCATCTCATAAAGAACCCGTACTTGGTTGCA
AAAATCGTAGAGGTTTTATTCGTCATCAATCTATCCCTGCCGATGAAGCTGAAGAACGTC
TACGAGAAGTTCATGGACCATCCCATGTCCCAGACGGCGCTGCCGAGTGCCCTGATGAAA
TTCTACACGGATATTGAAACAACGGGCCAGAGCACCGAGTTCTATGACAAGTTCACTATC
AGATTCCACATCAGCATCATACTTAAGGGAATGTGGGACAGACCCATACACAAACAGGCC
ATCGTCAAAGAATCCCGTTCGGGTCGACAGTTTGTCAAGTTCATCAACATGCTCATGAAC
GACACCACCTTCCTCCTCGACGAATGTCTGACGTATCTCAAACGTATCCACGAAGCTCAA
GAGGCTGAGGCCGAAGGCTCGAGCAGCAGCAGTAGCTCGAGTGAGGCTCGAACTCGAGCA
CTCGCGCAGGACGAGCGCCAGTGCCGCTCATACCTCACGTTGGCTCGAGAAACCGTGGAC
ATGCTCGAGTACCTCACAGTCGACATCAAAGAGCCCTTCCTGCGAGCGGAACTCGTCGAC
AGACTGGCGTCCATGCTCAACTTTAATCTACAACAACTCTGCGGGCCCAAGTGCAATAAT
CTTAAGGTCCGCCAGCCGGAGAAGTACGGCTGGGAGCCGCCATATAAATATATCAATATT
AACCGACATCAAAAAAGCCGACAAGCAAATTCAATCAATTGGTCGCTACATAGTCTTATT
AAAAGGTCCTTCCGCAAGGAGTTGTTTGATGAAGCAGCGGTTCGCCTCGCCAAGTCGTAT
ATTAAGACGCCCTCAGAGATAGAGCGGTTCAGGACTCTCGCTGACAACGCGTACCAGATC
GCTGTATCAAATCAGCAAAGAAGTGACGAATTCGCGGACGCACCCGAAGAATTCAGAGAT
CCCCTGATGGATACCCTGATGACTGACCCGGTCACCTTACCTTCTGGAAAGGTAATGGAT
CGTTCGGTGATCCTCCGCCATTTGCTTAACAGCGCCACCGACCCTTTCAACAGACAACCT
CTCACTGAGGACCAGTTGCGTCCAGCATTTAGACAAGAAAGGATCGACATCCTAAACCTT
CAGCCAAAGCTAAGTCTGATGTTTCCAATGTGCGACATAACATGTCATACATTATATATG
TTATATATAAAGACTAATGCTGGGTGTGTCCAGCGGCCGGACTATTGTCCCGATGGATGA
Protein sequence:
MSELSQEEIRRRRLARLAALGGTGSSVPTSPPITPGASVPPDVLSPGPPSRLSPASVPRS
STENADSKNKEQNYAENKSDVSDQTKIPADGLIVTEKPDNNLLDEMPDTKMTDLSQTRQY
NSFDSMGEDTLLSCGSVRVLPQSTVSGSEGASTREDSTSRSISPAQFVEPPPVRPRTHNA
SPSCSRRSLSMEVDDVSERNSQSEQTQEPMEVEDDSTQSPARKIQRSRTVSCTELTEEQL
RNIVAKILQVSWSDDSAGGIFVPSVAASLLDNPKLGLEEIASEALMDTLCQIIDGNDPLN
QKLIAITETTKRLSEDCGDGDDLLTSGHLGSEADASKSDCPTPSLPIQKPMPSQGLAVSY
ILKFYNNINLYERDHPKKSSEPPLSDLLQSFRTLLVNNLVLVLRGKYDLEKCRKSPLLPY
LLIGNTPIGLIPEVLLATYQDKEAFEEVFVPLLMGVREEMRRCVSPLVGRGHGAPLRALR
ALCELRAPPRHAARPVCALLARLPSLCPPSVTTAPGREIARVSFLGPFFAISLFAEENPR
FAERMFAGTDQSLSFALQREVEASRNTLHNICHNILLCPDAREPFLNYFATLLQRNERRA
QLQTDERSLAGDGFMLNVCSVLQLLSVRIKMDRVYELYTFQPDTWYNVRDETRLYFTAQE
AQEWQDALNNDPNHEWPEAKFQTVCWFLTLHMHHVALIPALHTHQRRIRAFRDLQKVIEE
LMAAEPQWRNSFSAFRNRELLRRWRRQIKRLHRSKQCAETALLDPELMRRGVQFYSSVCS
LLVRQLQSAASTGPSTPIASPSHAFRALPEWYVEDIAEFMLFAVQYVPQTVAYHIEDPIV
TWLLSAICNSHLIKNPYLVAKIVEVLFVINLSLPMKLKNVYEKFMDHPMSQTALPSALMK
FYTDIETTGQSTEFYDKFTIRFHISIILKGMWDRPIHKQAIVKESRSGRQFVKFINMLMN
DTTFLLDECLTYLKRIHEAQEAEAEGSSSSSSSSEARTRALAQDERQCRSYLTLARETVD
MLEYLTVDIKEPFLRAELVDRLASMLNFNLQQLCGPKCNNLKVRQPEKYGWEPPYKYINI
NRHQKSRQANSINWSLHSLIKRSFRKELFDEAAVRLAKSYIKTPSEIERFRTLADNAYQI
AVSNQQRSDEFADAPEEFRDPLMDTLMTDPVTLPSGKVMDRSVILRHLLNSATDPFNRQP
LTEDQLRPAFRQERIDILNLQPKLSLMFPMCDITCHTLYMLYIKTNAGCVQRPDYCPDG