| New model in OGS2.0 | DPOGS206837 |
|---|---|
| Genomic Position | scaffold1:- 2882839-2894270 |
| See gene structure | |
| CDS Length | 2427 |
| Paired RNAseq reads | 743 |
| Single RNAseq reads | 1922 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012784 (1e-123) |
| Best Drosophila hit | Ca-alpha1T, isoform C (4e-09) |
| Best Human hit | two pore calcium channel protein 1 isoform 2 (5e-152) |
| Best NR hit (blastp) | PREDICTED: similar to two pore channel 1 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Two pore calcium channel protein 1 (Voltage-dependent calcium channel protein TPC1) [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005244 voltage-gated ion channel activity GO:0005262 calcium channel activity GO:0006811 ion transport GO:0006816 calcium ion transport GO:0016020 membrane GO:0016021 integral to membrane GO:0055085 transmembrane transport |
| InterPro families | IPR005821 Ion transport |
| Orthology group | MCL17643 |
Nucleotide sequence:
ATGGCTTCTTTGAGGAGCCCGTCTTCGCCGACCGACGGTTATAAAAGATTCAGTGATGAT
TTTGCAAACACCAGTATCAACAATTACGGCTCCAACGTTACAAACAATCGTACTGGAGAT
GGCGCTGGAGACGGGACCCTGGACATGGGAAGCCGTTCATCACTCCACACCGGAATACAG
ATGTCGGAGGATGAGCATTGGGAAATGAACTATCATGAAGCCGCCATATATTTAGAGGAA
GGCCAAAACAATGAGAAGTTCGATTCGCACCCATCTAGTCCGGAGGAATTACCCGCATAC
CTCCGGGTACACAACCCCTGGTATCATGGTCTGGACCTCTTGGCTTCACTGGTACTTATA
CTGCTGGCCTTCACCGAAGATCCAGCTGTACCGGCTTTTGAACTACCAGTATGGGCTCAC
GGGACTATAGAGCTATTAGCGCTAACTATCATCGGTATAGAGTTACATCTCAAGTTAAAA
TGGATTGGATGGGGTACAATCTTTAAACATAAGAGGACTATGATCAAGGGTGTTACACTC
CTCATCATGGTGTTGGAGGCGGTTGTTGTGCTGTGTCGACAGTCTTCTCATTTCCGTGTT
ACTAGAGCCCTGCGTCCCATCTTTCTGGTTGACACCCGCCATTGCGGCGGCGTCCGACGT
TTTATAAGACAAATACTTCAGTCTTTACCACCCATCATTGATATGTTAGGTCTTCTAATG
TTTTTCGTAGCTACATATTCGTTGCTCGGTTTTTACTTGTTCTCGGAGCACGTGGACAAC
GGTCACTTTCAGACGATCAGCGATTCTTTCGTCAGTATGTTCGTACTGCTTACCACAGCG
AATTTCCCTGATGTCATGATGCCGTCGTATGCAAAGTCCAAGTGGTACGCGTTGTTCTTC
ATTCTCTATATAATCACTGTACTCTACGTACTAATGAATTTGATGCTGGCGGTGGTGTAC
GAGGCTTTCACCCGCATCGAGCGAGAAAAGTGTCGTGCGTTGTTGCTACACCGGCGAGGT
GCTGCTCACAGAGCTTTCCGTCTGCTGGTGTCGAGGAGAGCGCCGCGTGCTGTCCGCCTA
CGGCACTTTGCCGGTCTAATAAGACACTACGCACCGCATTACAGTGGTCTGGACGTGTAT
CTAATGTTCAAACAGCTGAACAAATCCGGTTCAGGAGGTCTGTCCCGGTCTGAGTTTAGT
CATGTGTACGACGTGTTCGCGCTTCGCTGGGCACCGCAGACGACGCGAGCTCCTTGGTAC
AGTGAATCGCCCCTGGAGCCACTCGCACGAGCAGCCGCCGCCGCCGTTAGATGGGACTAC
TTTGAATATCTGATATATGCTATAATAATCGGTAACGGCGTGTCTATGATTCTCCGCGTG
TTTGAGGCTGCCGGTGACTTACAGGACAGCGCACGTCTTTTGTGTGCCTCCTGGGATACA
TGGCTGTTCCTTGTCTTGTTCCTTGTGGAAGCATCTCTCCGTATGCTGGCTTCGGGCCTG
TCCTCATACCTGGAATCCGGGTGGAACGTATTTGACTTGAGCGTAACGCTACTGGCTCTG
CTTGGAGCTGTGATGCTGTCTATAGCACCCAAGCTATTCATCGTGGTGATGTTTAGACCA
TTGAGACTGATGCGGCTGTATAAGTTGAAGAAGCGTTACCGCGACGTGTTTGGTACTCTG
GTGCTGCTCTCGCCACTGATGTCGTCGGCCGGCTGCGTCATGCTCGTCATGTACTACTTC
TTCGCCATAGTCGGTATGGAGCTGTTTGCGGGATATGACCTCAGGAACTGCTGCGTTAAC
ACAACCGTGGAAGACTTTTATAAATACTCCGAGAACAGCTCCACTCCTCTTGGCTACTAC
TACCTAAACAACTTCGAGAACATTCTTACAAGTGGCGTTTCACTGTTCGAGCTGACCGTC
GTCAACAACTGGTTCATACTCATGAACGCTTACGCGATAGTTGTGGGGCAGTTCAGTAGA
GTGTACTTTATGGTATTCTATCTATTCACTATGGTGGTGTTAACGATCGTGGTGGCCAGT
GTGTTGGAGGCCTTCCGATTCAGGATACAGTACAAGAGAAGCACCACGAAAAGAGATGAG
GAAAAACTGCTACATGAGGAGGTGCATACGTCATGGGAAGAGGCACAGCGGTTCGGGGCA
ACCGGAGACTTGGCGGACGAATTGAGGGGATTCCTTCCACCAGGGATGGAAATGACATTT
ATCGGTACCAGGCCAAGGACGAAGGAAGTTTTACAGAGAAGGATGTACCAATCAGACATA
CAGAAGTGGTTGGCAGATGAGGATGATAATGATGATTTGCAACCCTCTACAACGACCACA
TCTAGTGATCCGCTGTCACCACCACTGATCCAGCAACCCGATTCAACCAACAATAACCAT
CAGATACGACCCGGTTACCAGTTGTAG
Protein sequence:
MASLRSPSSPTDGYKRFSDDFANTSINNYGSNVTNNRTGDGAGDGTLDMGSRSSLHTGIQ
MSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLI
LLAFTEDPAVPAFELPVWAHGTIELLALTIIGIELHLKLKWIGWGTIFKHKRTMIKGVTL
LIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLM
FFVATYSLLGFYLFSEHVDNGHFQTISDSFVSMFVLLTTANFPDVMMPSYAKSKWYALFF
ILYIITVLYVLMNLMLAVVYEAFTRIEREKCRALLLHRRGAAHRAFRLLVSRRAPRAVRL
RHFAGLIRHYAPHYSGLDVYLMFKQLNKSGSGGLSRSEFSHVYDVFALRWAPQTTRAPWY
SESPLEPLARAAAAAVRWDYFEYLIYAIIIGNGVSMILRVFEAAGDLQDSARLLCASWDT
WLFLVLFLVEASLRMLASGLSSYLESGWNVFDLSVTLLALLGAVMLSIAPKLFIVVMFRP
LRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFAIVGMELFAGYDLRNCCVN
TTVEDFYKYSENSSTPLGYYYLNNFENILTSGVSLFELTVVNNWFILMNAYAIVVGQFSR
VYFMVFYLFTMVVLTIVVASVLEAFRFRIQYKRSTTKRDEEKLLHEEVHTSWEEAQRFGA
TGDLADELRGFLPPGMEMTFIGTRPRTKEVLQRRMYQSDIQKWLADEDDNDDLQPSTTTT
SSDPLSPPLIQQPDSTNNNHQIRPGYQL