| New model in OGS2.0 | DPOGS206885 |
|---|---|
| Genomic Position | scaffold1:- 1618591-1635825 |
| See gene structure | |
| CDS Length | 2880 |
| Paired RNAseq reads | 1026 |
| Single RNAseq reads | 2452 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012843 (0.0) |
| Best Drosophila hit | CG11033 (7e-161) |
| Best Human hit | lysine-specific demethylase 2A (3e-121) |
| Best NR hit (blastp) | PREDICTED: similar to F-box and leucine-rich repeat protein 11 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to F-box and leucine-rich repeat protein 11 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003677 DNA binding |
| InterPro families | IPR002857 Zinc finger, CXXC-type IPR013129 Transcription factor jumonji IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR001965 Zinc finger, PHD-type IPR006553 Leucine-rich repeat, cysteine-containing subtype |
| Orthology group | MCL11255 |
Nucleotide sequence:
ATGAACGGTGCTGAACTTACAGTGGCCTACCTCCAGAAACATGGCTTCACAACCCCATTG
CTTTTCAAAGAGAAACTTGGGTTGGGTTTAAGAGTGCCAACCAGCAACTTCACAGTTAAC
GATGTGCGCATGTGCGTCGGCTCGAGGCGGCTTCTCGACGTCATGGATGTTAACACACAG
AAAAATATTGAAATGACAATGAAGGATTGGCAGCGTTACTATGACGACGAGAACAAGGAG
AGGCTGCTGAATGTAATCTCGTTGGAGTTCTCACACACACGTCTCGAGAACTACGTCCAG
GCGCCGCGTATTGTGAGACTTATTGACTGGGTGGATACAGTCTGGCCGAGACATTTGAAA
GATCAACAGACTGAATCGACGAACGCGTTGGATGAAATGATGTACCCGAAGGTCCAGAAG
TATTGTCTCATGTCCGTCAAAGGTTGTTACACGGATTTCCACATCGACTTCGGCGGCACG
TCAGTCTGGTACCACATACTGAGAGGAGCAAAAGTATTCTGGCTTATTCCACCCACTGAA
AAGAATCTCCAGCTGTACGAGAAGTGGGTGCTATCCGGGAAGCAATCGGACGTTTTCTTC
GGTGACACGGTCGAAAAATGTATAAGAGTTCATTTACAAGCCGGTTACACATTCTTCATA
CCGACCGGTTGGATACACGCTGTATACACACCGAGTGATTCACTCGTCTTCGGAGGCAAC
TTCCTGCATCAGTTCGGTATTGAGAAACAGTTGAAGATAGCTCAAGTCGAAGACGTCACT
AAGGTGCCTCAGAAGTTTCGTTATCCGTTTTTCACTGAGATGCTGTGGTATGTACTTGAC
CGGTACGTGAGCGCGCTTTTGGGGCGGTCGCACCTCGCTCAAGAGGGACAGCCCGCGCCC
ACGACGCCCACGACGCCCACGCCGCCCGCGCCGCCCAAGGAACATGTTCACCTCACGCAG
AACGAACTTCACGGACTAAAAGCTATAGTGGTATATCTTCATCAGCTCCCAGCAGCCCGT
AAGTCAGTGCCCGAACTGCTAACGGATCCAATAGCATTGGTCCGTGATGTCCGTACTCTA
GTGGAACAGCACAGGCATGATAAACAACAGCTAGCCATCACTGGTCTCCCATTACTTAAA
GGTCCAGACGAGCCGTTGTCCGGAGAGCGTCGTCAGTCAGGAGGTCGGGGAGGTCGTGGT
GGTCATCGTGGTGGTCCCGCGCGACCACGGCCCGACCACGCCGCCAACGCGCCACGTCGC
AGGCGGACCAGATGCAAAAAATGTGAAGCCTGCCAGCGTACAGACTGTGGTGATTGCGTG
TTTTGTCATGACATGGTTAAGTTCGGTGGTTTGGGGCGAGCTAAACAGACTTGCATCATG
AGACAGTGTCTACAGCCAATGCTACCAGTGACAGCTTCCTGCGCCGTGTGTCATCTGGAC
GGATGGATGCAGACACCTGTAGCACCGCAGGCTAAAGGCAACTCAGGTCGTAACGGTCCA
TCAGTCCTGCGGGAATGCTCTGTTTGCTACAGCATAGTTCATCCAGCGTGTGTCCCTCCC
GGAGGACAGCTCAACGAGGACCTGCCTAACTCATGGGAGTGCCCCACATGCACCACCATG
GGTCTCAACCATGATTATAAGCCACGTCACTTCCGAGCCCGACAAAAATCTTCAGACTTG
CGTCGCATGAGCGTTGGATCCGACGCCAGTCAGCTGAGTCAACAACATAACACCACAACG
GCACAGACAAAATTACCAGCCCCACCTCCACCGGTGACTGTGAAGTCTGAGGCGGGATCG
GACAATGAAAGCAAACCTGAAAGCACTAACGTTAAATCAGAAGAAGAAATAAAACGCGAA
GAAGATCCATCAGAAGCACCCGAGGCGGAGGGAGTTGAGTGGGAGCCGACGGCGAAGAAA
CGACGAGCCAGCGATGAAGACGAGGCGCCTAAGAAACAAGCACTGAGAGCACATCTGGCG
CTGCAGCTGACACACCATTCAGCTAAAGCTTTAAAGAAACCAATATATCCTGTACGTCCG
GCTCCTCTGAACGTGGCCAATGTGAGCGGTGCGTGGCTGGATCGAGGGGCGATGCTGCGT
GTCTTCGCTAAGCTCACGCCACACGAACTGGCTACATGTGCCCTGGTCTGCAAGGCTTGG
GCAGAGTATTCAATGGACCCATCCCTATGGCGAAGTATGTCATTCGTTCAGGTGCGAGTG
TCGGCGGCGCAGTTGGCGGGCATAGCAAGACGACAGCCGCTCAGTCTGGGACTCGAGTGG
TGTCATCTAGCGAGACGACAACTCGCCTGGTTATTGGCTCGACTACCAGCCTTACGGTCG
TTATCCTTGGCTGGTTCCCCGGCAGAGGCCGCTTTAGCTCTTCGCTCCAGTACATGTCCG
CCCTTGACAGCCCTGGATTTATCTTTCGCTAGATGTTTAGATGATGCTAAATTACGAGGA
ATTCTAGCACCTCCTGAGAACTCTAGACCGGGAGGCGGAGCCAGGTCAGGAACCGAGCCT
TCAAGGTTGGCAGCACTGGCTGTTCTACGTCTACCAGGAACTGACATCACCGACGTTGCC
ATGTTGTATATTGTACAGGCTCTTCCCAAGTTATGCGAGCTGGATGCTTCATCCTGTGCC
CGTCTAACAGACGCTGGCGCGGCTCAGCTCGCGCTGCACGGCTTGCAGCGACTTTCGCTG
GCGGGCTGCAGGCTGCTAACAGAGGCCGCATTGGACCATCTCGCAAGATGCCCTAACCTA
GTTAGGCTGGACCTCCGACATGTACCACTTGTGTCTACACAGGCTGTCATCAAGTTCGCA
GCCAAAGCTAAACATAACCTCCATGTTAAGGATGTTAAGTTGGTGGAGTTGAGAACCTGA
Protein sequence:
MNGAELTVAYLQKHGFTTPLLFKEKLGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNTQ
KNIEMTMKDWQRYYDDENKERLLNVISLEFSHTRLENYVQAPRIVRLIDWVDTVWPRHLK
DQQTESTNALDEMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPTE
KNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGYTFFIPTGWIHAVYTPSDSLVFGGN
FLHQFGIEKQLKIAQVEDVTKVPQKFRYPFFTEMLWYVLDRYVSALLGRSHLAQEGQPAP
TTPTTPTPPAPPKEHVHLTQNELHGLKAIVVYLHQLPAARKSVPELLTDPIALVRDVRTL
VEQHRHDKQQLAITGLPLLKGPDEPLSGERRQSGGRGGRGGHRGGPARPRPDHAANAPRR
RRTRCKKCEACQRTDCGDCVFCHDMVKFGGLGRAKQTCIMRQCLQPMLPVTASCAVCHLD
GWMQTPVAPQAKGNSGRNGPSVLRECSVCYSIVHPACVPPGGQLNEDLPNSWECPTCTTM
GLNHDYKPRHFRARQKSSDLRRMSVGSDASQLSQQHNTTTAQTKLPAPPPPVTVKSEAGS
DNESKPESTNVKSEEEIKREEDPSEAPEAEGVEWEPTAKKRRASDEDEAPKKQALRAHLA
LQLTHHSAKALKKPIYPVRPAPLNVANVSGAWLDRGAMLRVFAKLTPHELATCALVCKAW
AEYSMDPSLWRSMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLLARLPALRS
LSLAGSPAEAALALRSSTCPPLTALDLSFARCLDDAKLRGILAPPENSRPGGGARSGTEP
SRLAALAVLRLPGTDITDVAMLYIVQALPKLCELDASSCARLTDAGAAQLALHGLQRLSL
AGCRLLTEAALDHLARCPNLVRLDLRHVPLVSTQAVIKFAAKAKHNLHVKDVKLVELRT