| New model in OGS2.0 | DPOGS207019 |
|---|---|
| Genomic Position | scaffold1:+ 975237-977212 |
| See gene structure | |
| CDS Length | 990 |
| Paired RNAseq reads | 154 |
| Single RNAseq reads | 440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG18271 (4e-50) |
| Best Human hit | structure-specific endonuclease subunit SLX1 isoform 1 (1e-52) |
| Best NR hit (blastp) | PREDICTED: similar to GIY-YIG domain containing 2 [Tribolium castaneum] (1e-68) |
| Best NR hit (blastx) | PREDICTED: similar to GIY-YIG domain containing 2 [Tribolium castaneum] (7e-71) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR000305 Excinuclease ABC, C subunit, N-terminal |
| Orthology group | MCL13156 |
Nucleotide sequence:
ATGACAGAACCAGAAATTGTTGAAGATTTCTATGGCGTATACCTGCTTTATTGTATAAAC
CCTAAATATAAAGGTCGTACCTACATTGGTTACACTCGGGACCCAAATAGAAGAATTATA
CAACATAACCGTGGCACCTGGGCTGGGGGAGCTCATAGAACTAGTAAAAGGGGACCATGG
AAAATGGTTATGATTGTGCATGGATTTCCAAATAACATTTCAGCATTGAGGTTTGAATGG
GCCTGGCAAAACCCAGGCAAGACAACAAGATTACAACACCTGGGGTTGTTTAAGAATGGT
CGGAAGGAAACTGTGTTCCAGTTCAAATTACGAGTCCTCAGTGAGATGCTCAGAGTGGGG
CCTTGGTGCCGTCTGCCATTGGTCATAAGATGGCTGGAAAATGATTTCAGGGAAGAGTTT
CCAGAAGCAAGGATGCCTCCTGAACACATGATTATATGCCAAGGCCCTGTAAAGAGTCAT
AATCTTAGAAACACAACAAACACCTCATCACCTGACATAATTTGTCGTTTATGTTCTGGA
CGTTTGAAAGCCTCAGAGCAACTGAGCTGTCCGAACTCAAATTGTGACTTAGTCGCTCAC
ATAACATGCTTGGCGGACAAGATGTTGCCTCCAGGAGAATATATACCAATTGATGGTAAA
TGTCCGCTATGTTATTTGAAGCTGAAGTGGGGAGATTTGATAAGAAAAATGAAAGGTTGC
TTGGACGCTGATATTAATGATGTATTAAGCCAGAATAAGGTTTTAGAGGACTGTGGTAAC
TTTGTCAATTATGACGTAATGGAGTCATCTAATGATGATGACGTATATACTCAAGATGAT
TTATCATTAAGGGCTAGTGATTCGTTAAATGGTGATATAAGAGATTCTGATGGTGAAAAC
GAAGACCAGGACGTCATTCGGATCCCAACACACGTTCTGGATGAACCGTCCTGGTTTACA
GACTGTCAAGATGATATAATAAATATGTAA
Protein sequence:
MTEPEIVEDFYGVYLLYCINPKYKGRTYIGYTRDPNRRIIQHNRGTWAGGAHRTSKRGPW
KMVMIVHGFPNNISALRFEWAWQNPGKTTRLQHLGLFKNGRKETVFQFKLRVLSEMLRVG
PWCRLPLVIRWLENDFREEFPEARMPPEHMIICQGPVKSHNLRNTTNTSSPDIICRLCSG
RLKASEQLSCPNSNCDLVAHITCLADKMLPPGEYIPIDGKCPLCYLKLKWGDLIRKMKGC
LDADINDVLSQNKVLEDCGNFVNYDVMESSNDDDVYTQDDLSLRASDSLNGDIRDSDGEN
EDQDVIRIPTHVLDEPSWFTDCQDDIINM