| New model in OGS2.0 | DPOGS208556 |
|---|---|
| Genomic Position | scaffold28:- 27406-35320 |
| See gene structure | |
| CDS Length | 3978 |
| Paired RNAseq reads | 905 |
| Single RNAseq reads | 2344 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010665 (9e-77) |
| Best Drosophila hit | rab3-GAP, isoform A (5e-121) |
| Best Human hit | rab3 GTPase-activating protein non-catalytic subunit (8e-73) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012543 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL009668 [Aedes aegypti] (5e-162) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0016192 vesicle-mediated transport GO:0008152 metabolic process |
| InterPro families | ND |
| Orthology group | MCL14927 |
Nucleotide sequence:
ATGTGTAATGTAGAACAATTTGCTGATTGTGGTGATATTCTAACGATAGGAAGAGCTTTG
TTTATATCTGAAAAAGAAGATCAAACTTGGCTTTCCACATGTTCAGTGTCACTTTCGTGC
TGCGGTAACTTGCTAGCAGTTGGATATAAAAAACGTATTTGTCTATTAACTGCTCAATGG
ATTAGTTCTACTGAAAGCAATACCTATCTAATAAGTTGGAGTGGTACCCTTCCTTCTGAA
ATTACTTCTTGTTTAGCTCTATCAATATGTCCTTCACAGCATTCCTCACAGAATGGACCA
GATTGGTTCTGTATAGTAGTTGGGTTTCAAAATGGTAGCATTGGCTTCTACACTAATACT
GGCCACTTATTATTGTTAGAGAAATTAGATGATAAACCAGTTCTAAAGATATCTTGCCAC
ACTGGAACATATGGTACATTACCAGATGATATTCACATACTTTTTCAAAGTGGTGTTTGT
GTGCTCTCTGGATCCAGTTTATTTCAAACATTAAGGAATGCTAAAGCTCAGATTGCTAAA
GTCCAAGCTGGGATTGTTGACAACTATGCTGTAGACAGCAGGAGTATTCCTATAAGGAAA
TGGAACTTCTCAGATCAAGAACAAATAAATGATGCTGCTGTTGTAGGTCTTGAGTTGAAA
AATACTTTTGATCATTTCCTAGCAGCTTCTACATACGGAGGATATGATATATGGTACCGT
TCCATACCTCCAGTTAATTCATTAATCCTTACGTCCGGTGTTGCACCGTATGTCGGATTT
CATTACGCTTTGGAAGGCGGAACCACTCCACCACTTCAGGATGTAGCGAGAGCTGTTGCT
AACAAAATAAAATCGGCCCTGCCAGGTTGGTTAGGTGGGTCTACAGAGACTGCTCCTATG
AATTCAGAACCACTAATAAAAGCGGAATCTCTATCCATGAGAAATGGTATATATGATTCA
CAACGCTCTGGGACCTTTGTCTCGATATCTCCTGATAGAAGGCTAGCTGCCTTCACCGAC
AGTCTAGGGAGAGTCTCTGTACTCGATATTAGCAAAGGTTATATCATCAGACTATTTAAA
GGCTGTAGAGATGCTCAATGTGCATTTATTCAGATCTTCGATGCTGATAATAAGAAACCT
CAGTTGTCTGTTGTTAAGGAAATAAGAAGGGCTATGTTTTTGATTATTTACAATCCAAAA
AAAGGTCTGATTGATATAAGGCTGATGCAAAGAGGCAGCAGAGTCGCTGTGTTTACGGCC
ACCAAGAATGGAAAACTCTTGTACAACACGTGTGGGCTGGTTGGTGCTGAGAGATCGTAT
AACCACAAGAGACTCAACTTGCCGGAGTTGCAATGCGTTCTTATAGATCCAGATGGAAAA
CTAAAGAAATTCAACATTCCCTTCTATTACTCATTGGAAGGTGAACATTTAGAGCGTTCC
AAAGATTTACACATCATCAGATCCGTAAGAGACATATTGAAGAAGTCAACAGACTTTAAT
GACGAAATAAAAGCAGAGATCCTTGAGAGTGCTGAAAAATTGAGGACATTACAGATTAAG
AAACATTGTATAGAAATGATTATTAAGAACTGTGACATATCCACGGGCATACTGGTTGCA
TGTTTGGAATTATTCTGGGACAGCCTTTCTGATGACGCGAATGAGCAAGTAAAAAAGCTC
AAAATCTATTTCGGCAATCTTGCACTAGTTACACTTTTCTTCCGTTTCATAAATAACGAA
AATACTGATGATATGGAGAACATGGTTGAAAAAGTATATGAAGCTTTTGATATAGAAAAA
ATATACGATGGTGAGGACGTGTCGTCTATAACACCTGAATTCCAGCTCTTGGAAGATGAT
AATTGCATATTAGAGAGGCTTCTCATCCTAGCACAGGAAAGTGACTTTAAAGGACAGCAG
AATAAAGTATCTTTCGCCGATAATCGAACGAGTTCTTACAGAGATTTCATATCATGTTTT
GTGTTAGAAGAAAGAAATCCATTCATAATGCTAAAACGAGACATAACTTCCGAAAAGCTT
AATAGTCTATCAGGCGATATCTTCAAATCCATAATAAAAGTCAAGGATTTCACCAAACTG
TCGAAGTTTATACGGGACAGTCAGATAGATCCCAAAGAAATAGTAAAACTTGTGATAATG
CATTTAATGGATATGTCATTGGAAGAAATAAATCTTAATTTGATTGAAAAGATTATAGCT
CTTCTTTATTACATCTGCAGCGTCTCGGATGAAGCTACAAATATAACATACAATGAACTG
TCGCCCTGGTGGGAAGATATACGGTCCTTGTTAGTTGATCTGTCGTGCCCTTTGAGAAGC
ATGATTCTTGCGATGGCTTGTAAAGCTGTGTCCAAAATGTTCGAAGAGTCATCAGAAAAA
GATGAAGCTTGGGAGACATTGACCAAGGAAAACGCAAAATGGGGCATACTTATTGGAAAA
TTGGAGGACATATCTATTTTAAGTATAATTCTAATGTTTAAGGCTAATTTTGTGGGTAAA
AAAATGCCTAAACTGCAATTAGACGAGGTTAATGTGAATTTAAAGTATATTTATACGAGA
GGCAAGGGTTCGGTAACCGAGTTAATAGCTAAATGGCTTTGTAGTATGGGAATACCTCCT
GAGGCAGTTGTGGCCAATGAGTTGATGGAGACGTTTGATAGCACTAGCACAGAACTAAGT
GGCTCAGTGGAAGATGAATCGTTCTTTGTATTTATGGAAAACAATCGATATCATGTTGAC
GAGAACCCCCAAATATTCAAGTGGTTGTCTCTCCTGCGGCGACAATTCCCTCTTAGTACA
GCAGCTAACTATCTCACTGCTAATATGTGTTGGGAGTACGCTATGGAATGGCAAAAGCAT
ATGTCGAAGACTGAGGTTTTAGAGGCTGTGGTACATTGTTTAGAAAATATCACAGATCTG
TATCTACGTTTGGGCCTTTTCTCCATCATTTGGTCCACGTATATACGACATATTTTTGAA
GCCAGCTGCCGTTTAGTGAACAAAGTGGGAAAGTTACCCAAGGACCACCTGTGCTTACAG
GACTTAGGATTCAACAGCGAATGCTTAGTAAGTTTTCTTAAAACAACTAGAAACTATTTG
GATAAATTTTACACGTGTTCTATGATGCCGTTTGTAAAGGACAAGACGGTGATACAATTT
GAAAAAATATGGGATGAGAGTCTTCCTTCGTTAGTTGAAGTGGCACAGGACACGAGAAAT
GTCAATGTTGATATATTGAATTTAAATTATCAAATCTCGTGCACGCTCTTCTACCAGTGC
CATTTTAATCTTAAATATTCAAAACCATTGGACACTCTGTATGACATAGATTACCAATAC
ATACTGGAAGCTCTCGGTGGCAACGTAGCGCAGAGAAATATAAGCATGACCTGCTCAGAA
AAATTAATGACGCCAAGAATGAAATATCTAACAAAGCTTATAAGAACAGCTATAGAGACT
ATCAGTTGTGTTGACCATGAAAAGTCTAAGGCCTATAACAATGAGGAATGCTTACAATGG
ATCGAAAACATTGGAGTTTTAGCCGATCTGTGGGGCATAGACACTAATTTTGTAAGACGA
CAGCACGTCATCGGATTGTACCATGTGGGATACGATGAACTGGCTGAGAATATTCTAAGT
TCCGTAACCGAACCGGAAGTTCTCTTATCACCTTTGCTAGCGATTACAATACAAAGACTG
AAGAGAAGTTTAGAGAACTGTAAGAATCAGCCAGAATGGATCGTGTCTATGCCACCCCAG
CTATACAAGCGTATGCAGAATACGCCATTGGACACAACGATTCCCGCCAACCCGTCTCTC
TCCACTACTATTCTAGTGTTGCAAAAACTGGTTTCACAGATTACAAAAAAAACATCGGAT
GCTGAAAGTACACAAAACGTTAAATTGGCTGAACTCATCATTGAAAGCTGCGGACTTTTG
ATACGACATAAATTATAA
Protein sequence:
MCNVEQFADCGDILTIGRALFISEKEDQTWLSTCSVSLSCCGNLLAVGYKKRICLLTAQW
ISSTESNTYLISWSGTLPSEITSCLALSICPSQHSSQNGPDWFCIVVGFQNGSIGFYTNT
GHLLLLEKLDDKPVLKISCHTGTYGTLPDDIHILFQSGVCVLSGSSLFQTLRNAKAQIAK
VQAGIVDNYAVDSRSIPIRKWNFSDQEQINDAAVVGLELKNTFDHFLAASTYGGYDIWYR
SIPPVNSLILTSGVAPYVGFHYALEGGTTPPLQDVARAVANKIKSALPGWLGGSTETAPM
NSEPLIKAESLSMRNGIYDSQRSGTFVSISPDRRLAAFTDSLGRVSVLDISKGYIIRLFK
GCRDAQCAFIQIFDADNKKPQLSVVKEIRRAMFLIIYNPKKGLIDIRLMQRGSRVAVFTA
TKNGKLLYNTCGLVGAERSYNHKRLNLPELQCVLIDPDGKLKKFNIPFYYSLEGEHLERS
KDLHIIRSVRDILKKSTDFNDEIKAEILESAEKLRTLQIKKHCIEMIIKNCDISTGILVA
CLELFWDSLSDDANEQVKKLKIYFGNLALVTLFFRFINNENTDDMENMVEKVYEAFDIEK
IYDGEDVSSITPEFQLLEDDNCILERLLILAQESDFKGQQNKVSFADNRTSSYRDFISCF
VLEERNPFIMLKRDITSEKLNSLSGDIFKSIIKVKDFTKLSKFIRDSQIDPKEIVKLVIM
HLMDMSLEEINLNLIEKIIALLYYICSVSDEATNITYNELSPWWEDIRSLLVDLSCPLRS
MILAMACKAVSKMFEESSEKDEAWETLTKENAKWGILIGKLEDISILSIILMFKANFVGK
KMPKLQLDEVNVNLKYIYTRGKGSVTELIAKWLCSMGIPPEAVVANELMETFDSTSTELS
GSVEDESFFVFMENNRYHVDENPQIFKWLSLLRRQFPLSTAANYLTANMCWEYAMEWQKH
MSKTEVLEAVVHCLENITDLYLRLGLFSIIWSTYIRHIFEASCRLVNKVGKLPKDHLCLQ
DLGFNSECLVSFLKTTRNYLDKFYTCSMMPFVKDKTVIQFEKIWDESLPSLVEVAQDTRN
VNVDILNLNYQISCTLFYQCHFNLKYSKPLDTLYDIDYQYILEALGGNVAQRNISMTCSE
KLMTPRMKYLTKLIRTAIETISCVDHEKSKAYNNEECLQWIENIGVLADLWGIDTNFVRR
QHVIGLYHVGYDELAENILSSVTEPEVLLSPLLAITIQRLKRSLENCKNQPEWIVSMPPQ
LYKRMQNTPLDTTIPANPSLSTTILVLQKLVSQITKKTSDAESTQNVKLAELIIESCGLL
IRHKL