New model in OGS2.0 | DPOGS209235  |
---|---|
Genomic Position | scaffold11188:- 940-1988 |
See gene structure | |
CDS Length | 558 |
Paired RNAseq reads   | 740 |
Single RNAseq reads   | 3121 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010959 (9e-76) |
Best Drosophila hit   | eclair (1e-69) |
Best Human hit | transmembrane emp24 domain-containing protein 9 precursor (2e-51) |
Best NR hit (blastp)   | transmembrane emp24 protein transport domain containing 9 [Bombyx mori] (1e-82) |
Best NR hit (blastx)   | transmembrane emp24 protein transport domain containing 9 [Bombyx mori] (3e-73) |
GeneOntology terms   | GO:0009953 dorsal/ventral pattern formation |
InterPro families    | IPR009038 GOLD IPR015719 Glycoprotein 25L-related |
Orthology group | MCL12848 |
Nucleotide sequence:
ATGATGCTGTTCAATATATCTTCTCTCCTATCCTTGTTATTAGCTTTAGATGTAGCCTCA
GCCCTGTACTTCCATATAGCTGAAGGTGAACGAAAATGTTTTATAGAAGAAATCCCAGAT
GACACCACAGTAATCGTAAACTATAAAGTGGAGTTATATGATCCTCGGTCGGGAGGATTC
ATGCCTTCATCACCTGGCATAGGAATGCATGTCGAAGTTCGCGATCCCAGCGACCGGGTG
GTACTCTCACGAGTATATTCATCAGAGGGAATGATTTCATTTACTTCTAACAACCCTGGA
GAACATGTCATCTGTATGTACTCCAATAGCACTTCCTGGTTTAGTGGTTCACAGCTGAGG
GTACACTTAGACATCCAAGTGGGTGAGCATGCAGTCGATTATGCCAATGTAGCTCAGAAA
GACAAGCTGACGGAACTTCAGTTGAGAATAAGACAGTTGCTGGATCAAGTGCATCAGATT
ACCAAGGAACAGAGTTATCAAAGAGTAAGTATTGATTATTCTGTTTTTTTTTTTTGTGTT
AAAAAGCATGTGTCATAA
Protein sequence:
MMLFNISSLLSLLLALDVASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPRSGGF
MPSSPGIGMHVEVRDPSDRVVLSRVYSSEGMISFTSNNPGEHVICMYSNSTSWFSGSQLR
VHLDIQVGEHAVDYANVAQKDKLTELQLRIRQLLDQVHQITKEQSYQRVSIDYSVFFFCV
KKHVS