| New model in OGS2.0 | DPOGS212973 |
|---|---|
| Genomic Position | scaffold235:- 48165-51663 |
| See gene structure | |
| CDS Length | 927 |
| Paired RNAseq reads | 10308 |
| Single RNAseq reads | 23812 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011618 (6e-127) |
| Best Drosophila hit | CG4769 (1e-88) |
| Best Human hit | cytochrome c1, heme protein, mitochondrial (5e-67) |
| Best NR hit (blastp) | cytochrome c1 [Bombyx mori] (6e-147) |
| Best NR hit (blastx) | cytochrome c1 [Bombyx mori] (3e-132) |
| GeneOntology terms | GO:0045153 electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity GO:0006119 oxidative phosphorylation GO:0005750 mitochondrial respiratory chain complex III GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c GO:0020037 heme binding GO:0005811 lipid particle |
| InterPro families | IPR009056 Cytochrome c domain IPR002326 Cytochrome c1 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal |
| Orthology group | MCL15305 |
Nucleotide sequence:
ATGGCGGCCGCCGTAGGCAGGATTTGTGGGGCACGACTTTTGCAAAAATATGGGATAGTG
GCTCCCCAGATTTGTCAGCTGTCCACTAATGCTCAGGCATGGACTAAGAGTAGGAAATTG
TGGTTGACCACATTAGGTGTGGGTGCGGGAGGTGTGGGAGCCTTACTGTTCGCATTGGAA
CAGTCAGTACAGGCTTCAGGCACGGAAGCACATCCCTACCACCAGCCTTGGAGCCACAAT
GGATGGTTCCAATCTCTTGATCATGCCAGTATTCGGCGAGGCTATGAAGTTTACAAGCAA
GTATGCAAGGCTTGCCACTCTTTACAGTACATTGCCTACCGTAACTTAGTCAATGTGAGC
CATACTGAGGAGGAGGCGAAGGCAGAAGCTGCTGAGGTCATGATTAAGGACGGTCCTGAT
GAGGAGGGCAACTATTTTGAACGTCCAGGAAAACTATCCGACTACTTCCCATCACCATAC
CCCAATGAAAATGCAGCTCGAGCTGCTAACAACGGTGCCTATCCTCCGGATCTATCTTTG
ATAGTGTCTGGTCGTAAGGGCGGCGAGGATTACATCTTCGCTCTCCTGACGGGTTACATG
GAAGCACCGGCTGGGGTCATACTGCGTGAGGGACAGAACTACAACCCATACTTCCCTGGT
GGTGCCATTTCTATGGCACAAGTTTTGTTCGATGAGGCTGCGGAATACACTGATGGTACT
CCAGCGACGGCTTCCCAGTTGGCAAAGGACGTGGCAACTTTCCTACGTTGGTGCTCTGAA
CCAGAGCTGGACGATCGCCGCCTCATGACGATCAAGGCCATTGGAATATTTTCCTTCCTA
GCCGCCATCGTGTACTACTATAAACGGCACAAGTGGTCCACAATGAAGTCCCGCAAACTA
GCCTACAAAGCGGTATCTAAGAAGTAA
Protein sequence:
MAAAVGRICGARLLQKYGIVAPQICQLSTNAQAWTKSRKLWLTTLGVGAGGVGALLFALE
QSVQASGTEAHPYHQPWSHNGWFQSLDHASIRRGYEVYKQVCKACHSLQYIAYRNLVNVS
HTEEEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYFPSPYPNENAARAANNGAYPPDLSL
IVSGRKGGEDYIFALLTGYMEAPAGVILREGQNYNPYFPGGAISMAQVLFDEAAEYTDGT
PATASQLAKDVATFLRWCSEPELDDRRLMTIKAIGIFSFLAAIVYYYKRHKWSTMKSRKL
AYKAVSKK