| New model in OGS2.0 | DPOGS206720 |
|---|---|
| Genomic Position | scaffold660:- 36210-39059 |
| See gene structure | |
| CDS Length | 1938 |
| Paired RNAseq reads | 34 |
| Single RNAseq reads | 87 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002879 (0.0) |
| Best Drosophila hit | CG5142 (1e-146) |
| Best Human hit | tetratricopeptide repeat protein 30B (0.0) |
| Best NR hit (blastp) | tetratricopeptide repeat protein 30 [Xenopus (Silurana) tropicalis] (0.0) |
| Best NR hit (blastx) | tetratricopeptide repeat protein 30 [Xenopus (Silurana) tropicalis] (0.0) |
| GeneOntology terms | GO:0005215 transporter activity GO:0005879 axonemal microtubule GO:0005929 cilium GO:0018095 protein polyglutamylation GO:0042073 intraflagellar transport |
| InterPro families | IPR011990 Tetratricopeptide-like helical IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing |
| Orthology group | MCL11238 |
Nucleotide sequence:
ATGATAAAAGAGTCCAGATACGAGGACGCTATAAAAGCTCTCAACGATGCTATTAACTTC
AATTCTAATAGAGCTGGATTATCTCTTCTCGGATATTGCTACTATAGAACTCAGTCTTTC
GTGGAAGCTGCCAATTGCTACGAACAATTATCAGCAATGCATCCTGACGTGCCCGAGTAT
AAACTTTACTTCGCTCAAGCTTTGTACGAAGCTTCCATGTTCGACGAAGCATACAAGGTT
ACTATGCAAGTAACCAGTCCGGAACTTGAGAAGAAAGTTACGAAGTTACAGTCTGCTATA
AAATATGGCGAAGACGACACCATGACAGCTAGAACCCTCGTAGAATCTTATCCCCAAGAC
GACCCTGACAAAGATATTAATCTGGGATGTTTGTTGTATAAAGAAAATCAATACGAGGAA
GCATTGCAAAAGTTTTCTAAGAGCTTAAACATTCTCGGATTTAATGCCCACTTGCATTAT
AATGTAGCCCTGTGCTACTTCAGACTTAAGGAATATCCTCAGGCTTTGAAACACATCACC
CTTGTTATTGAAAAAGGTATCCGGGATCACCCAGAATTAGGGGTCGGAATGCAATCCGAG
GCTTCGGAGGTCAAATCCGTGGGAAATACTTTGACACTGCATGAAACTGCATTGACGGAA
GTGTTTAATTTAAAAGCTGCTATAGAATATCAACTCAAGAACCTGGAAGCAGCCAGAGAA
GCGTTGTCGGACATGCCTCCGAGACACGAACACGAATTGGATGCTGTGACTCTTCATAAC
ATAGCTCTCACATCCATAGACATCAAACCTAACGATGGATTTGAAAAGCTTCACTTCTTA
CTACAACAAGATCCGTTCCCTCACGAGACCTTCGCCAATTTATTACTTCTATATTGTAAA
TTTGAATATTATGATCTCGCAGCGGATATACTGGCTGAAAACGCTCAGTTTACTTACAAA
TATCTAACACCATATCTTTATGATTTCCTTGATGCTATTATAACAAGCCAAACATCACCT
GAAGAAGCTTTTCAGAAGTATGAGGATATAGCTTCAAAACACGCCGAGCAGTTGAGGAAA
CTGACTAAGATCGTGCAAGAAAGCCGGTCCCAAGGTGACAACGAACAAGTTAAGAAAGCA
GTTATTGAATACGAAGAAGCCTTGGAGAGATATATTCCAGTGGTGATGGCTCAGGCCAAA
ATATATTGGGATATGGAGAACTACGGGCAGGTCGAGAAAATATTTCGTAAGTCCGTGGAG
TTCTGTAACGAATCTGACGTTTGGCGCTTGAACGTAGCCCACGTTTTATTCATGCAAGAG
AATAAGTACAAAGAAGCGGCGAGTTTCTACGAGCCCATAGTAAAGAAGCAGTACGACAAC
ATATTAGACGTCAGTGCAGTTGTTCTGGCTAATTTGTGTGTGTCATACATCATGACCTCA
CAAAACGAGGAAGCTGAAGATATCATGAGGAAAATTGAAAAAGAAGAGGAGCAGCAAATA
TTCGAAGACCCCCAGAAAAAATTCTACCATCTGTGCATCGTAAACCTAGTTATTGGAACT
TTGTACTGTGCGAAAGGAAATTATGAATTTGGAATATCTAGAGTCATTAAATCTCTGGAG
CCTTTTAATAAGCGCCTGGGCACTGACACGTGGTTTTATGCTAAACGCTGCTTCCTGTCA
TTTCTGGAGAATCTCGCCAAACATCTGATTGTGGTCAAGGACAACACTATTAAAGATTGC
ATGCAGTTTTTGGAGGGTGCTGAGACTTACGGCAGACGTGTCAGCACCGTCATAGAAACA
CCGTTTCAAGAAGAAGATGCCCACAATAAAGCCAAACAAACAGTGACGTACGAGGCTCGG
CTGCTGCGGTACATGTTCTACAAGTTACGTAGCATAGATGACTCTGTAACGATTAACAAA
TACGAGGATTTAAAATAA
Protein sequence:
MIKESRYEDAIKALNDAINFNSNRAGLSLLGYCYYRTQSFVEAANCYEQLSAMHPDVPEY
KLYFAQALYEASMFDEAYKVTMQVTSPELEKKVTKLQSAIKYGEDDTMTARTLVESYPQD
DPDKDINLGCLLYKENQYEEALQKFSKSLNILGFNAHLHYNVALCYFRLKEYPQALKHIT
LVIEKGIRDHPELGVGMQSEASEVKSVGNTLTLHETALTEVFNLKAAIEYQLKNLEAARE
ALSDMPPRHEHELDAVTLHNIALTSIDIKPNDGFEKLHFLLQQDPFPHETFANLLLLYCK
FEYYDLAADILAENAQFTYKYLTPYLYDFLDAIITSQTSPEEAFQKYEDIASKHAEQLRK
LTKIVQESRSQGDNEQVKKAVIEYEEALERYIPVVMAQAKIYWDMENYGQVEKIFRKSVE
FCNESDVWRLNVAHVLFMQENKYKEAASFYEPIVKKQYDNILDVSAVVLANLCVSYIMTS
QNEEAEDIMRKIEKEEEQQIFEDPQKKFYHLCIVNLVIGTLYCAKGNYEFGISRVIKSLE
PFNKRLGTDTWFYAKRCFLSFLENLAKHLIVVKDNTIKDCMQFLEGAETYGRRVSTVIET
PFQEEDAHNKAKQTVTYEARLLRYMFYKLRSIDDSVTINKYEDLK