| New model in OGS2.0 | DPOGS204316 |
|---|---|
| Genomic Position | scaffold644:+ 68896-75857 |
| See gene structure | |
| CDS Length | 1368 |
| Paired RNAseq reads | 1535 |
| Single RNAseq reads | 4396 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007586 (8e-34) |
| Best Drosophila hit | isocitrate dehydrogenase, isoform J (6e-141) |
| Best Human hit | isocitrate dehydrogenase [NADP] cytoplasmic (4e-150) |
| Best NR hit (blastp) | NADPH-specific isocitrate dehydrogenase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | NADPH-specific isocitrate dehydrogenase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0000287 magnesium ion binding GO:0004450 isocitrate dehydrogenase (NADP+) activity GO:0006102 isocitrate metabolic process GO:0006103 2-oxoglutarate metabolic process |
| InterPro families | IPR004790 Isocitrate dehydrogenase NADP-dependent, eukaryotic IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site |
| Orthology group | MCL19029 |
Nucleotide sequence:
ATGGATGGAGATGAGATGACCCGTATAATTTGGGAGAAGATTAAAGAGAAACTCATATTT
CCCTATGTTAAGCTGGACTGCCTGTACTACGATCTTGGTCTACCTCACCGAGACGCCACG
AATGATCAGGTTACCATAGACGCCGCCCACGCGATCCTCAAACACAATGTGGGCATCAAA
TGCGCTACCATCACACCCGACGAGCAGAGGGTTGAAGGCTGGAAAGATAAAGCAGATGAC
TTAGAACTGGACTGCCTGTACTACGATCTTGGTCTACCTCACCGAGACGCCACGAATGAT
CAGGTTACCATAGACGCCGCCCACGCGATCCTTAAACACAATGTGGGCATCAAATGCGCT
ACCATCACACCCGACGAGCAGAGGGTTGAAGAGTTTAAATTAAAGAAGATGTGGCTGAGT
CCAAACGGGACGATTCGTAATATTTTGGGGGGCACCGTGTTCAGGGAGCCCATTCTATGC
AAGAGTATACCGAGAGTTGTTCCTGGATGGACGAATGCTATTGTTATTGGCCGTCATGCT
CACGGAGACCAGTACAAGGCGCAAGACTTTGTTATAGCAAAACCTGGAAAGGTTGAGATG
GTGTACACAGCAGCAGATGGTTCTGTAGACAAGAGACTGCTGTATGACTTCAAATCACCA
GGTGTAGTTCAAGGAATGTACAATACCGATGAATCCATACAGGCTTTCGCACACTCAAGT
TTCCAGGTCGCTTTGCAAAAGAAATGGCCTTTGTACCTCTCAACCAAGAACACGATATTG
AAGTTCTACGACGGTCGCTTCAAGGATATTTTCCAGGAAATTTACGAACGTGATTACAAG
AAGCAATTTGAAGATGCCAAAATCTGGTACGAACATCGTCTGATCGACGACATGGTTGCT
CAGGCTATTAAGAGCTCGGGTGGGTTCGTGTGGGCCTGCAAAAACTATGACGGTGATGTA
CAGTCAGATGTCGTTGCACAGGGTTACGGCTCGTTAGGTATGATGACGTCAGTGCTCATG
TGTCCGGATGGTCGGACGGTTGAGTCGGAAGCAGCCCACGGTACTGTGACACGTCACTAC
CGGATGCACCAGCAGGGCAAGCCTACCAGCACCAACCCCGTCGCCTCTATATACGCTTGG
ACCAGAGGGTTGATGCACCGCGCCAAGCTCGATAACACTCCCGAGTTGGAAAGATTCTCT
AAATCACTGGAAGAGGCCTGTGTGGAGTGTATAGACAGCGGGAAGATGACCAAGGATCTA
GTGATCTGTATCCATGGCATGGCCAACACAAAGGAAGGGATGTATCTGAACACCGAGGAC
TTCCTGCAGGCCATTGCCGACCAACTCGAGCGGAAACTAACCAAGTAA
Protein sequence:
MDGDEMTRIIWEKIKEKLIFPYVKLDCLYYDLGLPHRDATNDQVTIDAAHAILKHNVGIK
CATITPDEQRVEGWKDKADDLELDCLYYDLGLPHRDATNDQVTIDAAHAILKHNVGIKCA
TITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVPGWTNAIVIGRHA
HGDQYKAQDFVIAKPGKVEMVYTAADGSVDKRLLYDFKSPGVVQGMYNTDESIQAFAHSS
FQVALQKKWPLYLSTKNTILKFYDGRFKDIFQEIYERDYKKQFEDAKIWYEHRLIDDMVA
QAIKSSGGFVWACKNYDGDVQSDVVAQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHY
RMHQQGKPTSTNPVASIYAWTRGLMHRAKLDNTPELERFSKSLEEACVECIDSGKMTKDL
VICIHGMANTKEGMYLNTEDFLQAIADQLERKLTK