| New model in OGS2.0 | DPOGS211400 |
|---|---|
| Genomic Position | scaffold337:- 133427-137783 |
| See gene structure | |
| CDS Length | 999 |
| Paired RNAseq reads | 628 |
| Single RNAseq reads | 2048 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010858 (1e-80) |
| Best Drosophila hit | CG6486, isoform B (9e-63) |
| Best Human hit | peroxisomal biogenesis factor 7 (6e-58) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP006264-PA [Tribolium castaneum] (1e-94) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP006264-PA [Tribolium castaneum] (3e-96) |
| GeneOntology terms | GO:0005777 peroxisome GO:0005053 peroxisome matrix targeting signal-2 binding GO:0007031 peroxisome organization GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL17935 |
Nucleotide sequence:
ATGCCAACCTTCCTGACACCTGGCCGGCATGGCTACAGTGTAAGATTTTCTCGAACGAAC
CCCGATACCCTGGCAGTAGCCACAAGCCAGTATTATGGTTTAGCTGGTGGTGGAACACTG
TTCTTTTTGGAACTAACACAAGACGGAAGCAATCTCGTTGAGTTACAGAAGATTGAATGG
AGCGATGGCCTCTTTGATGTGTCGTGGTCGGGGTGCACGGAGGGCTTCGCTTCGTGCGGG
GCGGGCGACGGAGCGGTGCTCGTTTGCCGGGCCGGGTGCTCCGCCCCCCTCAGAGTGTTG
AGAGGCCACCGAGGGGAGGTGTGCTCCGTGGATTGGCCCGGGAGACAGCTCTTGAGCGCC
AGCTGGGACACTACCGTCAAATTGTGGGACCCCGAGTCCGAGGCGTGTATCAGTACGTTC
TCGGGTCACTCTCAGCTGGTGTACTCGGCGTCCTTCTCCCCTCACTCCCCGGGGACCTTC
GCTTCCGTGTCCGGGGACGGTCACCTCAAGCTGTGGTCGTGTTCGGAGCAACGCCCTATA
GCCGTCATCAAAGCACACGATGCTGAGGTCTACCACAAAGACCATGAGGGACCAACTAAA
CTGTACAGTATCCCTGAGTCTCCTGTTTCCACTTCCTGGCTGTCGTGTGACTGGAGCGGG
GCGGAGAGTCGTCTGGTGGCGAGCGCCGGCTCCGACGGGTTGGTGAAGGGCTGGGACCTC
CGGAGCCTCGCCGCTCCCGTCTTCACACTCAGAGGTTGTGAACGCGCCGTTCGTCGCGTG
CAGTTTTGTCCGCACGCGCCGGCCGTGCTCGCCGCCGTCTCCTACGACTTCACCACCAGG
ATCTGGGACCTAAAGCTGGGTTGGTCTCCGTTGGAGACTATCCGTCACAGGTCGGAGTTC
ACGTTCGGTCTAGACTGGAGCGCGCTCCGGCCTCGCTCGCTGGCAGACTGCGGCTGGGAC
TCCCTGGTGCACGTGTTCGTCCCTAGAACACTCATGTGA
Protein sequence:
MPTFLTPGRHGYSVRFSRTNPDTLAVATSQYYGLAGGGTLFFLELTQDGSNLVELQKIEW
SDGLFDVSWSGCTEGFASCGAGDGAVLVCRAGCSAPLRVLRGHRGEVCSVDWPGRQLLSA
SWDTTVKLWDPESEACISTFSGHSQLVYSASFSPHSPGTFASVSGDGHLKLWSCSEQRPI
AVIKAHDAEVYHKDHEGPTKLYSIPESPVSTSWLSCDWSGAESRLVASAGSDGLVKGWDL
RSLAAPVFTLRGCERAVRRVQFCPHAPAVLAAVSYDFTTRIWDLKLGWSPLETIRHRSEF
TFGLDWSALRPRSLADCGWDSLVHVFVPRTLM