| New model in OGS2.0 | DPOGS201845 |
|---|---|
| Genomic Position | scaffold22:- 7337-14473 |
| See gene structure | |
| CDS Length | 2964 |
| Paired RNAseq reads | 390 |
| Single RNAseq reads | 984 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006097 (1e-06) |
| Best Drosophila hit | wing blister (3e-97) |
| Best Human hit | laminin subunit alpha-3 isoform 1 (7e-60) |
| Best NR hit (blastp) | PREDICTED: similar to wing blister CG15288-PB, isoform B [Apis mellifera] (1e-120) |
| Best NR hit (blastx) | PREDICTED: similar to wing blister CG15288-PB, isoform B [Apis mellifera] (1e-139) |
| GeneOntology terms | GO:0005605 basal lamina GO:0007267 cell-cell signaling GO:0005488 binding GO:0005604 basement membrane GO:0030155 regulation of cell adhesion GO:0005102 receptor binding GO:0045995 regulation of embryonic development GO:0030334 regulation of cell migration GO:0005606 laminin-1 complex |
| InterPro families | IPR002049 EGF-like, laminin IPR000034 Laminin B type IV IPR006210 Epidermal growth factor-like IPR018031 Laminin B, subgroup |
| Orthology group | MCL10101 |
Nucleotide sequence:
ATGCCTGATGATTGCAGCCGCCTGATAATGTTGTCTGCAGTCATGCTCCTTCAATGGGTT
TTGGATAAGGTTGCAACTGTTCGTCGTTGGGTTCCGAGAGCAATGTGTGCGACATACGCT
CGGGGCAGTGTCGCTGCAGACCGCACGTCACCGGCCGAGCTTGTGACACCTGCGAGGAAG
GCTACTGGGGTCTCCAGCATGGAGGGTGTCGTCGCTGCGAGTGTGGTGCAGGGGCTGCGG
CCTGTGACCCTGTCAGCGGCCTGTGCGCCTGTTCCGTTGGTGTGGGAGGTGCAAGGTGTG
ACCGATGCCTCAGCGGCTACTATGGTTTTGGACCCACCGGATGTTTACTGCACGCCCGGG
TACTGGGGACGAATCGCCGGCTGTCACACATGTGACTGTGGACCGGGAGCCGTAGGAGGT
AACTGTGACCCCGTGTCCGGCCAGTGTAGTTGTCGCCCTGGCTGGACCGGTCGCGCGTGT
GACCGCTGCGCTCGCGCACACTACGGTCCTCGCTGCAGACCTTGCGGCTGTCACCGAGCG
GGCACGCGGTGTGAAGATGGGCTGTGTCCTTGCGATAGCAACGGACAGTGTCCCTGTAAG
GATAATGTAGTGGGTGAGAAATGTGATCGATGCTTGGAAGGTACTTTCGGTCTCTCGGAG
TCCAATCCAGTGGGCTGCACGGCTTGTTTCTGCTTCGGACGCAGCGCTCAGTGCACTCAA
GCCGCCGTCTCCCGAGCCGCGCTTCACAACGCTGTGCCTCTTCACCTCAGGTTGATGAGG
GGCCACATCATTACTACTATGGATCGCCACTCCCCGCTGGCCATCCACACGAGTGTTCAG
GACGCCCACATCACCCTCCCGGACCCTCCAGTGCCGGTGTACGCCGAGCTCCCGTCCTTG
TTCCTGGGTGACCGCGTGCTCTCTTACGGGGGCGCGTTAAGGTTCCGTGTGGAACAGGAG
GGTGGCACCCCCATACCTCGTGACGTACTGATCGACTTCCCACTCGTCAGCATATATGGA
TACAACATCGTGCTGGATTACTATGAACGCGCGCCTCCAATAAACAATACGTATGCTGTA
TATCTGCACGAGTCTCTGTGGGAGGTGCGGGGCGCGGGTACTGGAGGAACAGGGGCCGTT
GCTTCCCGCGGAGCGCTCATGTTGACTCTGAGGGATGTGCGACGTCTGCTGCTTCGAGTC
TCGACCCGAGAACCGACCGACGAGCCGTTACATGTTTTATTGCTGAACGTGACCCTGGAG
ACGGCTATCCCTGGCCTGTCCCGTGGGGCGCCGGCCCCGGGCGTGGAGCGCTGCTCGTGT
CCCCGAGGCTACTCCTCCGGTTCGTGTCAGCGCCCCGCGGCCGGGTTCTGGTCGCCGCCC
TCCCCACCGCTCGTGACGCATGTGGCTGGTACCATCGTTATCCACGTAGAACCTGTCAGA
CCCTGTGAATGTAACGGCAGGGCCGCCACCTGTGATCCTGCCACCGGACATTGCTTGAAC
TGCACCGCCAACACTTCAGGGCCGCACTGCGACCACTGCGCTGAAGGTTACTACGGCACG
CCTGATCGTGGCTGCGAGCCTTGCCCCTGTCCAGCTCACGGTCCCGTGAGGGCCACCGGC
TGTGCCGCCTCGCACGGGAGACTGCACTGCTACTGTCACCTCGGCTACACGGGGTCTCGC
TGTGAGTCTTGTTCTGCGGGCTGGCGGCGGGAGGGGGGCGCCTGCGTCCCGTGTTCCTGT
GACCCCCGCGGGGCGCTGTCTCAGCGTTGTGAGGGTGGACGCTGCCATTGTCGTCCGTAC
GCCACGGGTACACGATGTCAGCTGTGTGCACAACCAGGTTTCTATATGGATGAGGAGGGT
TGCAAACCTTGTGACAACTGCACACAGACTCTACTACTGTCAATGAAAGACCTAACGAGA
GATCTACACTTACGGGCGGATCTGTCGGAGCTTAGTAGAATACCGCAACCTTTTCCGGCA
CTTAGAGAATTTGCAAATAATGCATCAATTCTAGAAGCATCGCTTAAACAATGGCGGACA
AACAAAGAAAAATCTCTATTAATCAAATCGGCATTATTAAAATTAGAATCTACCGAACAT
GAACTTTTTACATCTTCCAATAAACTTAAAACAAAAGCATCCAGAAGAGAGAAAGAGGCG
CAGTATTTAAGCTTAGAAAGTATGAGTGGGTTGGAAGAAGTATTCAAGAAAAAGAGGGTT
TTGGCGGAATATGTTGCTGATCTGGATGATTTTGCGAGAGGAGAAAAGCATCTGAGCGCT
CACAGAGCCTTAAAAGAAGCGAGACATTTGCTTAAAATGATAAAAGAATTAAATTTAGTA
GATTTTATGACCGGAGCTAACGATGTATCTGATTCGGCCAACCTCCAATCAACTTCTGTA
CATGAATACAAATACCGTATCGATGATAGTTTCCAAAAAATTTATAAACTGCATTCAAGT
TTAGAAGATTGGGAACGTAAGGCAGAAGACTTACCACGTCTAGCAGGTATTGTGTGGAGC
GCGGGTGACACGGTGGTAGAAGGCAGTAAGAAAATAAAACCGAAACTTGCAAGGGTTCGG
GATGTAGGATTGCAATGTAGGCTTGTATTAGAGGACATCTCTAACTTATCCACTAACAAC
CTTACTGAAGAAACACGGGCAGCTTTATTACATACCCAAAATCTTGCAGTTGGGTTCCCA
ACTTTACTATCTACCCTCCGAAACCTAACAACACAAGCCGAGGAAAAGGAAGGCATTCTA
TACAACCTTACTCCTAAATACAAAGAAAAATATTTAGATGTAGTTAAAGAACACGTGGAG
AACCTTACAAAAAAAGCCAGGGAATACAAAAATTTGTTTGCGGGAACACGATCGGTTGCA
TCTGCTGGAGTCCAAGCAGCTCGCGCCTGGTCCGAAGTGGCCGCTGGAGTTAGAGATGCT
GTAGCCCGCCGACTACGTCGGTGA
Protein sequence:
MPDDCSRLIMLSAVMLLQWVLDKVATVRRWVPRAMCATYARGSVAADRTSPAELVTPARK
ATGVSSMEGVVAASVVQGLRPVTLSAACAPVPLVWEVQGVTDASAATMVLDPPDVYCTPG
YWGRIAGCHTCDCGPGAVGGNCDPVSGQCSCRPGWTGRACDRCARAHYGPRCRPCGCHRA
GTRCEDGLCPCDSNGQCPCKDNVVGEKCDRCLEGTFGLSESNPVGCTACFCFGRSAQCTQ
AAVSRAALHNAVPLHLRLMRGHIITTMDRHSPLAIHTSVQDAHITLPDPPVPVYAELPSL
FLGDRVLSYGGALRFRVEQEGGTPIPRDVLIDFPLVSIYGYNIVLDYYERAPPINNTYAV
YLHESLWEVRGAGTGGTGAVASRGALMLTLRDVRRLLLRVSTREPTDEPLHVLLLNVTLE
TAIPGLSRGAPAPGVERCSCPRGYSSGSCQRPAAGFWSPPSPPLVTHVAGTIVIHVEPVR
PCECNGRAATCDPATGHCLNCTANTSGPHCDHCAEGYYGTPDRGCEPCPCPAHGPVRATG
CAASHGRLHCYCHLGYTGSRCESCSAGWRREGGACVPCSCDPRGALSQRCEGGRCHCRPY
ATGTRCQLCAQPGFYMDEEGCKPCDNCTQTLLLSMKDLTRDLHLRADLSELSRIPQPFPA
LREFANNASILEASLKQWRTNKEKSLLIKSALLKLESTEHELFTSSNKLKTKASRREKEA
QYLSLESMSGLEEVFKKKRVLAEYVADLDDFARGEKHLSAHRALKEARHLLKMIKELNLV
DFMTGANDVSDSANLQSTSVHEYKYRIDDSFQKIYKLHSSLEDWERKAEDLPRLAGIVWS
AGDTVVEGSKKIKPKLARVRDVGLQCRLVLEDISNLSTNNLTEETRAALLHTQNLAVGFP
TLLSTLRNLTTQAEEKEGILYNLTPKYKEKYLDVVKEHVENLTKKAREYKNLFAGTRSVA
SAGVQAARAWSEVAAGVRDAVARRLRR