| New model in OGS2.0 | DPOGS201845 |
|---|---|
| Genomic Position | scaffold22:- 244-7264 |
| See gene structure | |
| CDS Length | 3321 |
| Paired RNAseq reads | 596 |
| Single RNAseq reads | 1385 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006098 (1e-123) |
| Best Drosophila hit | wing blister (1e-73) |
| Best Human hit | laminin subunit alpha-2 isoform b precursor (5e-29) |
| Best NR hit (blastp) | GH11139 [Drosophila grimshawi] (2e-123) |
| Best NR hit (blastx) | GH11139 [Drosophila grimshawi] (7e-84) |
| GeneOntology terms | GO:0005605 basal lamina GO:0007267 cell-cell signaling GO:0005488 binding GO:0005604 basement membrane GO:0030155 regulation of cell adhesion GO:0005102 receptor binding GO:0045995 regulation of embryonic development GO:0030334 regulation of cell migration GO:0005606 laminin-1 complex |
| InterPro families | IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR008985 Concanavalin A-like lectin/glucanase IPR001791 Laminin G domain IPR012680 Laminin G, subdomain 2 IPR012679 Laminin G, subdomain 1 |
| Orthology group | MCL10101 |
Nucleotide sequence:
ATGTCTTCAGAGATACTAAAAAGGAAAGGCAATGAGTTGATGTCAAGAACCAGTGATTTA
CATCGAGAACTAGAAGTTGCCCAACGCGGAATAGACGTTGTTAGCGTCGGTCTTCGTGGC
TTAGGATGGCGAGAGCGTGCTCTGGCCAGTGGCGCCGAGGGAGGTATGATGAATGGCGGT
ACAGCTGCAGTAGCAACACTGAAACAAGCCAGTACACAAGCGGAGAGAGTATTTGCAAGT
AGCCGAGTGCTATACGACGAGGCGGCGGATCTTAGGAGAAAAGTACGATACCAACTGCGA
CGAAATCTTGCCGCACTTCAACGTATGGGAGATACCGCGCTGGGTGCTGCGGAGGAACAT
GTGTCCCAAATACGAGGAAACACGGACCGTGGACGCGAGGTAGCAGCGGCACTTGCAGCG
GCAGGGGCAGCGCGCGCTCGGGAACATGCGGCCGCCGCCACTATTTTGTCTCCTGCACTG
AAACGTCTTCACAGCGGCATCCTGCAAGCACAGCATGCAGCTGCCACAATATCTGTGTCA
GTCACCTCACCCGCCGGCGGTGTCGGATGCGCGCGAGCGTATTCCTCGTGGAGTGCTCCA
TCAGCAACGCGCGCTACTCTCTCTCTAAGTTTTGATTCCACTTTAAGAGATGGCACGCTG
CTGTATTTACCTGATCAGGATTCCGAGCGCTATCTTCGTCTTTCCGTATCAGCTGGGAAA
CTGATTGTGCGGTGGGACGTAGGTGGAGGCGTCGGCTACTTGGAGCACCCTGAGCCACTC
ACACCCACTGTTGACGACGCTGACCACACTGTTTATCGACTTCAGATTGAAAGAGTGTGG
AACACAGTGCGGCTTCGTACTGAACGATCTGGAAGCGCCGTCACCACGTCTACAAATAGC
ACGACGTCGTCCCCAAGCACGGGGCTCCTGCGTCCACAGTACTGGTGGCTTGGAGAACCC
GATGCTCCTTTGCCGGCCTGTGTACATTCCTTGCACGCTGATCACTTGGCTTTAGGCCTC
TGGGCTTTTGCAAAACAGCACACGAATTCAAAATGTACAGGTTGTACCCAAAGATGGACG
AGCCAACGTGGCGAGAGCCTTGCACGTCTAAGCGGTGCAGGCTACGTCACCTTGCGCCGC
TCGCGGCCCGCCGACCGCCGACGGTTCAGTCTTGCTTTGTCCTTTCGTACCACTGACCAC
AACGCTCTGCTATTTATGGCACACGATCATGTTAATAATCGCTCGGTGTCAGTGTGGGTG
CGAGAGTGCCGCGTAGTATTTAAAGTGCAGTACGCGAATTCTCGACTAGAGATTACAGCT
GGAGGAGACCACTGCGATGGTAAACCGACCCATGTCCAGGCCACCAGAGTTTTTAATGGA
CTAGAGAGAGGCAGCCTGCGCGTAAACGGTGAAGAGACTCTAGGCTCACCATCCCCGCCG
GTGCAGGCCGCGGGTGACCTGCCAGAGCTGGAAGGAGCCTACTGGGTGGGAGGATTGCCG
CCCGACGCGCAAGGTCTTTATGAGGCTCCCTCACTTCTTGGCTGCATCGGAGGCCTCGTA
GTGGACAGAGAGGGCTACGATCTGCTGGACACTCCCACACGGTATGGGTTGGAGCCAGGA
TGTTCAGCTAGGGCACTTCGGTCTGCAGTATTAGACGGCGACGGCTACATCGAGCTGTCA
TCGCCCGCCATTCGACGTAAGACTTCGATTGGTGTATCGTTCAGAACACGATCTCCGTCC
GGCCTGCTGATGTACAGAGCACCCTCAATATCCGTCCAGGATAATGAGGTGGACGACGAA
GAAGATGATAATCATTGCCTCGTTCTCGCTCTCGTGAATGGTGAATTGGAAGTGATCGCA
AACGCCGGCAAAGGTGAATTGCGACTACGGATAAATGAGACTAAATACGATGATGGTGGA
CTGTACACTGTACGGCTGGTCCGGGTTCATAAGCAGCTGGAAGTATGGGTGGACGAAAAA
CGCATGGCTGCCGGTAATCTTCCGGGGGGAGCTATTGCGGCGAGGGCGCGTGGTTTGTTC
TTGGGAGGGTCGCCTTCTCCCGTCACCTATCTCACCGTGCCCTCCTTCACGGGGACTATC
GCAGACTTCATAGTGGATTCTACGTGGATAGGTCTGGAGTCCAGCGTCTCCCATTTCCGA
GCTCGTCTCGGTCGAGCCCAGACCGCCGCCCCAAGACCGACGCCCACCGCCGTCAACACG
CGGAATGACCTCACCAACTGTGCTAAGTTATCGTCATATGCGGTGGAAGCAGGCGCTGTG
AAGTTCGGTGACGCCGTCCCGAGTTACGCAGCTCTGAGGGCAGCCCGCGCCGCCTTGTTT
AGTTTCAGTCTTCAGTTGCGAACTTTCGCTAAAGACGGAATCGTCATGCTCTTGCCGGGC
TCCAAGCAGAAACCTCGTCACTATGTCGCTTTGTTGTTGCGTGAGGGTCGGGCTCGACTC
ATGGTTCGTGGAAGGAGACGCAAAGAATTGGTGCTACCGGGAAACGTCAGCGACGGCGAA
TGGCATGAGTTGTCAGTGCGTATCTCCCGTAGTCGCCTCGTGTTATCCTCGGGCTCCGCG
GCGGTGACAGGCAGGGCTCCGCCTCACGCTCGCGCCGCGCGCTTGTACCTGGGAGGCCCG
CCCCCCGCCGCTGCTATACCACACGTACCGAATTCACTGTTGAAGCTGGGAGGGCTGGTG
GGTTGCGTGCGTCGCGTGGCGGTCGGAGGACGAGCTGAGGACCCGGTCAGAGACGCGCGT
GCTCACGTCGCCGTCTCACAGTGCTTCCCCCGCGTCGAGCGAGGAGCATATTTTGGAGGG
GACGCGTATGCCGAGTGGTCGGAGACGGGGTTCGCAGGCTTAGGGGGTGAGGAGGGTGAG
GGAGACAGCGTGGAGCTGCGGCTGGAGTTCCGCGCCACCAGCGGGGTTGGACTCCTGGCC
GCTTTTGCTGGAGCCCTGCTGGAACTGAAGGACGGCATGGTGGTGTTAAGTCGGGGAGGA
ACGTCAGTCGAGAGCGGCGGTCGAGTGTGTGACGGTAGATGGCACGCGGCGGCGGCCCGA
GTGTGGCGCGCCGGGCTCAGCCTGTCCCTGGACGGAGCGCCCCCTGAACGAGCAGCTCCT
GCTCTGATAGCACCTGCCGCTCCGCCAACCGGGAACTCCTTATACGTAGCTGGACTACCT
GAAGGAGCCCGCGACATGGGCGATGGGCGAGAGAACTTCAAAGGTTGTGTTCGTGACGTC
ACTTACCGAGGCTCGGCTCGGAGCTGGAGGGCGGCCAGTCTACATCACGTGCTGCTTGAT
TCCTGTCCTGTGTCACACTGA
Protein sequence:
MSSEILKRKGNELMSRTSDLHRELEVAQRGIDVVSVGLRGLGWRERALASGAEGGMMNGG
TAAVATLKQASTQAERVFASSRVLYDEAADLRRKVRYQLRRNLAALQRMGDTALGAAEEH
VSQIRGNTDRGREVAAALAAAGAARAREHAAAATILSPALKRLHSGILQAQHAAATISVS
VTSPAGGVGCARAYSSWSAPSATRATLSLSFDSTLRDGTLLYLPDQDSERYLRLSVSAGK
LIVRWDVGGGVGYLEHPEPLTPTVDDADHTVYRLQIERVWNTVRLRTERSGSAVTTSTNS
TTSSPSTGLLRPQYWWLGEPDAPLPACVHSLHADHLALGLWAFAKQHTNSKCTGCTQRWT
SQRGESLARLSGAGYVTLRRSRPADRRRFSLALSFRTTDHNALLFMAHDHVNNRSVSVWV
RECRVVFKVQYANSRLEITAGGDHCDGKPTHVQATRVFNGLERGSLRVNGEETLGSPSPP
VQAAGDLPELEGAYWVGGLPPDAQGLYEAPSLLGCIGGLVVDREGYDLLDTPTRYGLEPG
CSARALRSAVLDGDGYIELSSPAIRRKTSIGVSFRTRSPSGLLMYRAPSISVQDNEVDDE
EDDNHCLVLALVNGELEVIANAGKGELRLRINETKYDDGGLYTVRLVRVHKQLEVWVDEK
RMAAGNLPGGAIAARARGLFLGGSPSPVTYLTVPSFTGTIADFIVDSTWIGLESSVSHFR
ARLGRAQTAAPRPTPTAVNTRNDLTNCAKLSSYAVEAGAVKFGDAVPSYAALRAARAALF
SFSLQLRTFAKDGIVMLLPGSKQKPRHYVALLLREGRARLMVRGRRRKELVLPGNVSDGE
WHELSVRISRSRLVLSSGSAAVTGRAPPHARAARLYLGGPPPAAAIPHVPNSLLKLGGLV
GCVRRVAVGGRAEDPVRDARAHVAVSQCFPRVERGAYFGGDAYAEWSETGFAGLGGEEGE
GDSVELRLEFRATSGVGLLAAFAGALLELKDGMVVLSRGGTSVESGGRVCDGRWHAAAAR
VWRAGLSLSLDGAPPERAAPALIAPAAPPTGNSLYVAGLPEGARDMGDGRENFKGCVRDV
TYRGSARSWRAASLHHVLLDSCPVSH