New model in OGS2.0 | DPOGS213165 |
---|---|
Genomic Position | scaffold9733:+ 55-1255 |
See gene structure | |
CDS Length | 423 |
Paired RNAseq reads | 20 |
Single RNAseq reads | 390 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007350 (3e-20) |
Best Drosophila hit | Vti1 (3e-17) |
Best Human hit | vesicle transport through interaction with t-SNAREs homolog 1A (3e-12) |
Best NR hit (blastp) | hypothetical protein TcasGA2_TC006472 [Tribolium castaneum] (4e-26) |
Best NR hit (blastx) | hypothetical protein TcasGA2_TC006472 [Tribolium castaneum] (2e-21) |
GeneOntology terms | GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0016192 vesicle-mediated transport GO:0006886 intracellular protein transport |
InterPro families | ND |
Orthology group | MCL14197 |
Nucleotide sequence:
ATGGTGAACGAACAGAAACAGAAGCTTTTGGACAATACAGAACGGCTGGAACGGACGGGG
AAAACCTTGAACGATGGTTACCGAGCGGTGCTGGAGACGGAAGAGATCGGGGCGGCGGTG
CTCCAAGACCTCAACCTGCAAAGAGAAACCATACAGAGATCCAGAACACGGCTACGTGAG
ACGGATGAACAGCTGTCTCGCTCTGGACGTCTCATGAACACTATGGTGACCCGAGCTCTG
CAGCAGCGTGCTGTTCTAGCCGCTGTGCTGCTAGTCTTGGTCATTCTAGCAGCACTAGGG
GCCCGACAATTGACTATGAGCGCCTGCGAAAAATATGCGAGCAATAACGCAAGGACTCGG
GACGCGGTGAAGATAGGGTCTGTGCGTAACGAAGTGCGGGACGTGCAACATCTGAATTTG
TAA
Protein sequence:
MVNEQKQKLLDNTERLERTGKTLNDGYRAVLETEEIGAAVLQDLNLQRETIQRSRTRLRE
TDEQLSRSGRLMNTMVTRALQQRAVLAAVLLVLVILAALGARQLTMSACEKYASNNARTR
DAVKIGSVRNEVRDVQHLNL