| New model in OGS2.0 | DPOGS209174 |
|---|---|
| Genomic Position | scaffold596:- 12104-19175 |
| See gene structure | |
| CDS Length | 2865 |
| Paired RNAseq reads | 262 |
| Single RNAseq reads | 636 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011528 (1e-124) |
| Best Drosophila hit | clumsy, isoform B (3e-121) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 1 precursor (1e-104) |
| Best NR hit (blastp) | Anopheles gambiae str. PEST AGAP012447-PA [Anopheles gambiae str. PEST] (2e-155) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC001185 [Tribolium castaneum] (6e-148) |
| GeneOntology terms | GO:0015277 kainate selective glutamate receptor activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity GO:0005234 extracellular-glutamate-gated ion channel activity GO:0030288 outer membrane-bounded periplasmic space GO:0006811 ion transport |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 IPR001828 Extracellular ligand-binding receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGTTTGTAATAATGTTGTGGTTATTTATTGTTTGTTTCGTTCAGCCGTCAACCTCTGAG
ATCCGTTATACGGAAACTAGACAGAGTTTTTATCAAATAGCTGGCATTTTTGAAAACAAT
ACGCTCACACAACGGCTTGCTTTTAATGAGAGTATACGTTACGCCAATTTGGGAAAAGCT
GAATTACAATCAATGTCTGATGCTCAAGGCGGCAAAGTAAAGGACCTGAGACTTGAGCCT
GTCATCTTTCGACCGGGACGGTCAGACAGCTATTCGATATGGAAAGATTTATGTTCAAAC
ACAACTATGCAACCGATAGCTATATTCGGTCCTCAGAATTCCGTCACCGACAACATCATA
CGCGATCAGTGCTACGTATCAAATATTCCGCATATTCAAGCTAACTTGCAGTTAGCGGAC
CCTGATATGGAGCTGAACCCAGTTGAAGCTACAGACGAAGAATCCACTGAAGATCAGGGG
CTTAAGTTTAAAAAGATATCCATAAACTTTTACCCGCCGGCAGAGGATATATTGTACGCT
TACGCCATGTTACTAAAGTACTACAAATGGAAAAACTTCGCAGTTCTCTACGAAGATGAC
TTAGGTCTGTTGAGAATACAGAAGATACTCTCTGAATATACAGAAGACTATCCCCTCACT
ATCAGAAGACTAGACCCGAACGCCGATAACCATAACATATTTAAAGATCTCAAGAAATTC
AACGAATATCGGGTCATAATTGATTGTGATGTCGACCGCGTTGTCCAATACCTCACGGAA
GCCAGAGAAGTGAACATGGTCAACCATTACGAGCATTACATTTTAATAACGATGGATGCG
TCGGTGGTTGCGGAAGAACTGCGACAATTCCAATCGAATATAACTTGGCTCAGTATAACG
GAATATGACAAGCTACAAAATTCCCAACATTTCCTGACGCCGAGGGTTGGAAGGTGGACG
AGTGAAACGAGCGTCGTCTATCCACCTGTCACTGATATCAAAACGTCAGCGCTGCTAATG
GATGACATAGCGAACCACGTATTAAAAGCGTTGCAAAAAGTGGAAATGGTGGAGAGCATT
GAAAACAGAACAATGAGTGATATATGTGGACCGGAAAGCGAGCCGTGGGAGTTCGGGGCC
TTGCTTCAGGATGAAATATTGAAGACAAAAACAACAGGCGTCACTGGAAATATAGAATTC
AACGAATTAGGACAAAGAGTTAATTACACTCTTTATGTAAACGAAATTTATGTTTCAACG
TTGGATACAATCGGCACTTGGGACTCGACAGCAAGAGGTGAAATTATTGAAGATAGACCT
GAATCTGAAAATTATGATAAAAAGAAAAATGTTAAACATTTCTATATTATATCTAAAAAA
GCGAAACCGTACTTTTACGATAAAATAAAATGTGCGGAAGATGATCCAGATTGTGTTGAA
GAAAAAGCTGATGAAAATTACGAAGGATTTTCTGTGGACCTCGTCAAAGAAATCTTTGAT
ACGTTGCGAAAACATAATTTTAATTTTACATATTCTTTTTTGCCAAAAACATACACTGAT
TACGGCAAATACAGACCGGAAGAAAAGAAATGGGATGGCTTGATAGGAGATCTCTTAGAT
AAGAGTGCCGATTTAGCTGTGTGCGACCTAACTATCACTGAGGAAAGAAAAAAAGTGGTC
GACTTTTCAGTACCATTTATGTCTCTGGGTATTAGCATTCTGTATATTAAAGAAAAAGAA
GTTGAACCAGCTATGTTCTCCTTTCTCAATCCATATACATTTGATGTTTGGATCCACACG
GCAACAGCGTTTTGTGTTGTATCAATTATTCTTTTTGTGTGTTCGAGAATATCTCCAGCA
GATTGGGAAAACCCACAGCCGTGTGATAAAGATCCAGAGGAATTGGAAAACATATGGAAT
TTCAAGAACTGTACGTGGCTCGCTATGGGGTCCATTATGTGTCAAGGATGCGACATCTTA
CCGAAAGCAATCGGCACACGTTGGGTTTGTTCTATGTGGTGGTTTTTCGCAGTTATCGTA
TGTCAGACATACATAGCACAACTTTCAGCTTCAATGACCGAAGCTTTGGAAAATGAACCT
ATTACCAAGGTAGAAGACTTGTCCACACAAACCAAGGTCCTATATGGTGCGATCGATGGT
GGTTCCACCCTTGGTTTTTTTAAGAATTCCAAGGATAAAATGTTCAATAAAATGTATGAA
AATATGGTACAAAATTCAGCGGTTTTAGTTAAAACTAATAAAGAAGGTGTTAAGAGGGTT
ATAAAAGGCAACGGAAAATATGCCTTCTTTATGGAATCCACGTCCATAGAATACGAACTG
AAAAGGAACTGTGACCTTAAAAAAGTTGGTGAGGAATTGGATTCTAAAGACTACGGCATT
GCCATGCCCGCTAACTCTCCGTTCAGGAAGTATATCAACCGAGCTATTTTGGAACTGAAA
GAATTCATGGTGTTAGATAAGATCAAACGAAAGTGGTGGGAGGAGAAGAATGTGATTCAA
CCGTGTGAGGTTGAAGAAGACAAAAACGATGTGGAGGGAGATCTTGAAATGAAAAATTTG
AAAGGAGCTTTTGTTGTTCTCATAGTTGGGCTTGCTATCTCCATGGTAATTACTGCGTTT
GAATTCATGAACGAAGTCAGAAATATTGTCGTGCGAGAACAGGTGTCTCACAAAGAAGTT
TTTATTAAAGAACTGAAATCTTCGCTGAATTTCTTCCAACTTCAGAAACCGGTTATAAGA
AACCCAAGTCGTGCGCCATCTGTAGCATCTTCTGGCAGTGAAAAGAAGAACAATAGAAAT
AATGCCATTGAGAACTTGTTAGAATTTGAAAAAGTGCAACAGTAA
Protein sequence:
MFVIMLWLFIVCFVQPSTSEIRYTETRQSFYQIAGIFENNTLTQRLAFNESIRYANLGKA
ELQSMSDAQGGKVKDLRLEPVIFRPGRSDSYSIWKDLCSNTTMQPIAIFGPQNSVTDNII
RDQCYVSNIPHIQANLQLADPDMELNPVEATDEESTEDQGLKFKKISINFYPPAEDILYA
YAMLLKYYKWKNFAVLYEDDLGLLRIQKILSEYTEDYPLTIRRLDPNADNHNIFKDLKKF
NEYRVIIDCDVDRVVQYLTEAREVNMVNHYEHYILITMDASVVAEELRQFQSNITWLSIT
EYDKLQNSQHFLTPRVGRWTSETSVVYPPVTDIKTSALLMDDIANHVLKALQKVEMVESI
ENRTMSDICGPESEPWEFGALLQDEILKTKTTGVTGNIEFNELGQRVNYTLYVNEIYVST
LDTIGTWDSTARGEIIEDRPESENYDKKKNVKHFYIISKKAKPYFYDKIKCAEDDPDCVE
EKADENYEGFSVDLVKEIFDTLRKHNFNFTYSFLPKTYTDYGKYRPEEKKWDGLIGDLLD
KSADLAVCDLTITEERKKVVDFSVPFMSLGISILYIKEKEVEPAMFSFLNPYTFDVWIHT
ATAFCVVSIILFVCSRISPADWENPQPCDKDPEELENIWNFKNCTWLAMGSIMCQGCDIL
PKAIGTRWVCSMWWFFAVIVCQTYIAQLSASMTEALENEPITKVEDLSTQTKVLYGAIDG
GSTLGFFKNSKDKMFNKMYENMVQNSAVLVKTNKEGVKRVIKGNGKYAFFMESTSIEYEL
KRNCDLKKVGEELDSKDYGIAMPANSPFRKYINRAILELKEFMVLDKIKRKWWEEKNVIQ
PCEVEEDKNDVEGDLEMKNLKGAFVVLIVGLAISMVITAFEFMNEVRNIVVREQVSHKEV
FIKELKSSLNFFQLQKPVIRNPSRAPSVASSGSEKKNNRNNAIENLLEFEKVQQ