| New model in OGS2.0 | DPOGS209467 |
|---|---|
| Genomic Position | scaffold24:+ 159888-166105 |
| See gene structure | |
| CDS Length | 1800 |
| Paired RNAseq reads | 2769 |
| Single RNAseq reads | 7282 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005845 (7e-73) |
| Best Drosophila hit | lace (1e-132) |
| Best Human hit | serine palmitoyltransferase 3 (7e-99) |
| Best NR hit (blastp) | GI17899 [Drosophila mojavensis] (2e-171) |
| Best NR hit (blastx) | PREDICTED: similar to serine palmitoyltransferase [Nasonia vitripennis] (5e-139) |
| GeneOntology terms | GO:0004758 serine C-palmitoyltransferase activity GO:0030170 pyridoxal phosphate binding GO:0009058 biosynthetic process GO:0016769 transferase activity, transferring nitrogenous groups |
| InterPro families | IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase, major domain |
| Orthology group | MCL11253 |
Nucleotide sequence:
ATGAGACAGATCAAAGTAATCAATAGTGGGTGCGGTGTCACTGAAATTAGGAGATATGAG
GAGTGCGGAGGTGATCCTGTCGTGCCTCTCCGCAGTTTCGAACTGAAAGGTCTGCGCGCC
GCTCGCCGGCTGCCGCTGGACGACGTCACTCAGCACGACAAACGTGCGGTTAGGACGGCG
AGGATGGTGGACACCACGGTAGTGACTAGTGTTGATTTAAGAGAAACTAATTTAAACAAA
AATGTACAATGTAATGGAAGTAGTGGAAAAAATATCAATGGAAAAATACATCTACAGAAT
GGGTCTTTAAAATCTCAAACTATAAGTAATGGATCCAATAAATGTAAGGACGAGAACGAG
CGATTTCCGACGATGGACTGGTCTCAGTACGACACCTTCCCCGGCTCCTTCGAGAAGTGT
TCCCTGATGACGGCGGCCCTAACTCACGTGGGCATGTACCTGCTCATGTTTCTCGGCTTC
GTGAACCAGCTGCTCTTCAAACCGAAGGTGGCCACCGAGAGGAACCGGGAGGGCTACGCA
CCGCTGTACAACCCGTTCGAGCAGTTCTTCTCCCGCTACGTGTACCGCCGCGTGCGACAC
TGCTTCAACCGCCCCATCAGCTCCACGCCCGGCGCCGAATTGACGCTCAAGGAGCGCCAC
ACGGACGATTACAACTGGTCCTTCAGGTTCACGGGCAAGGAAAAGCGCTGCATTAACCTG
GGCTCCTACAACTACCTGGGCTTCGCGGAGGCGTCCGGCCCCTGCGCGGAGGCGGCGGAG
GCGGCCGCCAGGCGCTACGGCCTCGCGCTTGCGTCCTCCCGCGGCGAACTCGGCTCTACG
CCGCTGCACGACGAGTTGGAGCGGACCACCGCCGGCTTCCTCGGCGTGGAAGCGGCCGTG
GTGTTCGGGATGGGATTCGCGACCAACGCGCTCGGCCTGCCGGGCCTGCTTGGGAGCGGC
TCGCTCGTGCTCAGCGACGAGAACAACCACGCCTCGCTCATCCTGGGCCTGAGGCTCGCC
CGCGTCGCCGTGCGCGTTTTCCGACACAACGACGTGCGACACTGCGAGCGACTGGCCCGA
GCCGCCCTGGCTGAGGGACGTTGGACGAAGATCGTCATCGTGGTGGAGGGCGTGTACAGC
ATGGAGGGCTCCGTGGCGCCTCTGGCCGCTCTCGTGGCCCTCAAGAAACGTCTCGGCTTG
TATCTATATCTGGACGAGGCGCACTCGGTGGGGGCCATGGGTCCACGCGGCCGCGGCGTC
ACCGACCACTGCGGCGTCTCCCCGCGGGACGTCGATGTCCTCATGGGCACCTTCACCAAG
AGCTTCGGCGCCGCTGGGGGATACATAGCGGGCTCCGAGAAGCTGGTGGATTGGGTCCGT
GCCCGCTGTCACGCGCACGGCTACGCCCACGCCATGTCTCCCCCGGTTGCGGCGCAGGTG
CTGGCGGCCATGCGCGCCATATCCTCGCCCGTCGGCCTCAAGCGCGTGGCTCGTCTGAGG
GACAACACTCATCACTTCCGGCGCCGGCTCCGCGAGATGGGCGCCATCACCTTCGGCCAC
GAGGACTCGCCCGTGGTGCCGATGCTGGTGTACACCTTCAGTAAGATGGCGGCCACCGTG
GAGCGCCTCACGGAGCGCGGCCTGGCCACGGTCGGCGTGGGCTACCCCGCCACGCCCCTC
AACAAGGCTCGCATCAGGTTCTGTCTGTCGGCGGCGCACTCCCGGGAACAGATCGACCGC
TGCCTGGATTCCATCGAGGCCGTCGTGGAGGAGGTGGGTCTGCGGTACTCCCGCCGCTAG
Protein sequence:
MRQIKVINSGCGVTEIRRYEECGGDPVVPLRSFELKGLRAARRLPLDDVTQHDKRAVRTA
RMVDTTVVTSVDLRETNLNKNVQCNGSSGKNINGKIHLQNGSLKSQTISNGSNKCKDENE
RFPTMDWSQYDTFPGSFEKCSLMTAALTHVGMYLLMFLGFVNQLLFKPKVATERNREGYA
PLYNPFEQFFSRYVYRRVRHCFNRPISSTPGAELTLKERHTDDYNWSFRFTGKEKRCINL
GSYNYLGFAEASGPCAEAAEAAARRYGLALASSRGELGSTPLHDELERTTAGFLGVEAAV
VFGMGFATNALGLPGLLGSGSLVLSDENNHASLILGLRLARVAVRVFRHNDVRHCERLAR
AALAEGRWTKIVIVVEGVYSMEGSVAPLAALVALKKRLGLYLYLDEAHSVGAMGPRGRGV
TDHCGVSPRDVDVLMGTFTKSFGAAGGYIAGSEKLVDWVRARCHAHGYAHAMSPPVAAQV
LAAMRAISSPVGLKRVARLRDNTHHFRRRLREMGAITFGHEDSPVVPMLVYTFSKMAATV
ERLTERGLATVGVGYPATPLNKARIRFCLSAAHSREQIDRCLDSIEAVVEEVGLRYSRR