New model in OGS2.0 | DPOGS201950  |
---|---|
Genomic Position | scaffold329:- 51325-62158 |
See gene structure | |
CDS Length | 423 |
Paired RNAseq reads   | 16 |
Single RNAseq reads   | 275 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000160 (1e-54) |
Best Drosophila hit   | sticks and stones, isoform B (2e-38) |
Best Human hit | nephrin precursor (8e-16) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC003360 [Tribolium castaneum] (1e-45) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC003360 [Tribolium castaneum] (8e-44) |
GeneOntology terms    | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0007520 myoblast fusion GO:0007523 larval visceral muscle development GO:0007157 heterophilic cell-cell adhesion GO:0007514 garland cell differentiation |
InterPro families    | IPR007110 Immunoglobulin-like IPR013783 Immunoglobulin-like fold IPR013098 Immunoglobulin I-set IPR003599 Immunoglobulin subtype |
Orthology group | MCL18446 |
Nucleotide sequence:
ATGTGCTCGAAATTAGATTTCGCTGTCATTCTGTGCGCACTTCCCATAATCGCCTGTTTC
CAACAGCAATACTTCAGGGTCCCACCAAAGAGTTTGAGGGTCCAGGAAGGATCAGAAGCC
GTTCTAGAGTGCGCCGTTGCTAATCTGGCTGGCCAGGTTCAATGGGCGAAAGATGGATTT
GCTCTTGGCTTCTCATCAGTTATACCGGGATATCCTCGCTACACGATGTTCGGGGATCGC
CGTCACGGTATCTACAACCTTCGCATCATAAACACCACTTTGGAAGACGATGCTGAATAT
CAGTGTCAAGTTGGACCAGCCCAAATGCACAAAGTCATTAGAGCGAACGCCAGCCTTACA
GTTATATGTAAGTATCGCTTTCCTTATAGAAACAAATACACACTAACATCGACTGTTCAA
TAA
Protein sequence:
MCSKLDFAVILCALPIIACFQQQYFRVPPKSLRVQEGSEAVLECAVANLAGQVQWAKDGF
ALGFSSVIPGYPRYTMFGDRRHGIYNLRIINTTLEDDAEYQCQVGPAQMHKVIRANASLT
VICKYRFPYRNKYTLTSTVQ