| New model in OGS2.0 | DPOGS202255 |
|---|---|
| Genomic Position | scaffold108:- 7762-9813 |
| See gene structure | |
| CDS Length | 1266 |
| Paired RNAseq reads | 670 |
| Single RNAseq reads | 1462 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004993 (1e-39) |
| Best Drosophila hit | CG2100, isoform B (7e-118) |
| Best Human hit | tRNA-nucleotidyltransferase 1, mitochondrial (4e-104) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009040 [Tribolium castaneum] (8e-145) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009040 [Tribolium castaneum] (2e-142) |
| GeneOntology terms | GO:0004652 polynucleotide adenylyltransferase activity GO:0006396 RNA processing GO:0003723 RNA binding |
| InterPro families | IPR002646 Poly A polymerase, head domain |
| Orthology group | MCL15635 |
Nucleotide sequence:
ATGGAGATTAAGACGCGGGAAGATCCTATAGTTTTAAAATTAGATACAGCAGAGTTCCAC
AACATATTTACTCCAGAAGTGATAGACTTGAAAAAACTTTTTGAGAAATATCAATATGAA
ATTAGAATAGCCGGTGGTGCTGTCAGGGACTTGTTACTCGGTCAGCCTGCTAAGGATCTT
GATTTCGCAACAACAGCAACACCACAACAGATGAAAGAAATGTTTACCGCTGAGAATGTG
AGGATGATTAACATGAGTGGTGAAAAACATGGAACTATCACTCCAAGGATAAATGACAAA
GAGAACTTTGAAGTCACCACGCTCAGAGTGGATATAGTCACGGACGGCAGACATGCTGAG
GTTGAATTCACTAAGGACTGGAAGCTGGATGCTAATAGACGAGATCTGACAATAAATTCT
ATGTTTTTAGGGTTTGATGGATCTGTCTATGATTACTTTTATGGATACGAAGATTTGATG
AAAAGAAAGGTTGCATTTGTCGGTGATCCCGATATAAGGATAAAAGAAGACTTCTTAAGG
ATAATGCGGTACTTCCGTTTCTATGGCAGGATCTCTGAAAAACCTGATAACCACGACCGG
CACACCCTTGATGTCATAAAGCAAAACGCTGAGGGACTTCAAGGTGTATCAGGAGAGAGA
ATATGGATGGAATTAAAGAAAACATTACAGGGAAATTTTGCTGGTGACCTACTAAAAACT
ATGCTTAAACTGGATATCGGCAAATACATAGGTTTACCGAAACCGAATTTGGAAGAATTT
GAGGGTCTACTAAAGAGAAGCGAACACCTTAGCTTGCATCCTATGACCTATCTGGCAGGA
TTATTAAACACTATAGACGATGTAACAATATTACATGCGAGACTCAAATTTTCCAGTTAC
GAAAGAGACATGGCTTATTTTATTGTTGAACATAGACCAGATAAAGATGCCTCCAGGCCC
CTTCTGCCCTACGAAAAACTGGTTCTGAACACAAAAATAAAACAGAAAGACGCAGTTGAT
TACGTGCGTGAAGTGCTTAAATACCGCGGAGACGAAAAGTTACTCGACATGTTCAATAAA
TGGGAGGTGCCCAGGTTTCCGATGACAGGGAAGCTTCTTAAAGAAAATGGCGTACCGCCT
GGGAAGATGTACGGCCAAATTATAAATAGGCTGAAGGAATACTGGATAGAACAGGAATAT
AAAACCTCTGCTGAGGATTTAACTAAACTAATACCAAGTTTAATAGATGAGTGTAAGACG
AAATAA
Protein sequence:
MEIKTREDPIVLKLDTAEFHNIFTPEVIDLKKLFEKYQYEIRIAGGAVRDLLLGQPAKDL
DFATTATPQQMKEMFTAENVRMINMSGEKHGTITPRINDKENFEVTTLRVDIVTDGRHAE
VEFTKDWKLDANRRDLTINSMFLGFDGSVYDYFYGYEDLMKRKVAFVGDPDIRIKEDFLR
IMRYFRFYGRISEKPDNHDRHTLDVIKQNAEGLQGVSGERIWMELKKTLQGNFAGDLLKT
MLKLDIGKYIGLPKPNLEEFEGLLKRSEHLSLHPMTYLAGLLNTIDDVTILHARLKFSSY
ERDMAYFIVEHRPDKDASRPLLPYEKLVLNTKIKQKDAVDYVREVLKYRGDEKLLDMFNK
WEVPRFPMTGKLLKENGVPPGKMYGQIINRLKEYWIEQEYKTSAEDLTKLIPSLIDECKT
K