| New model in OGS2.0 | DPOGS208661 |
|---|---|
| Genomic Position | scaffold594:- 19842-29050 |
| See gene structure | |
| CDS Length | 4032 |
| Paired RNAseq reads | 1170 |
| Single RNAseq reads | 2865 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007759 (0.0) |
| Best Drosophila hit | CG9727 (7e-46) |
| Best Human hit | DNA-binding protein RFX7 (2e-31) |
| Best NR hit (blastp) | GF16654 [Drosophila ananassae] (6e-54) |
| Best NR hit (blastx) | GF16654 [Drosophila ananassae] (2e-52) |
| GeneOntology terms | GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR003150 DNA-binding RFX |
| Orthology group | MCL18929 |
Nucleotide sequence:
ATGGATAGTTCAACTCCGTTTCAACCTTGGTCTAGTGACGATAATTCAAAGAATGTTAAA
TCTGAGCGAGAATTAGTAGATGACGCGAAACTTCATCGGGAAAATGTCAATCATCCAAAA
CATAGGCAAACTGCGTCTTACAATAAAGAAAGTGTCGTCGATCCTAGCGTCGTTCCTGGA
CCATCGAGTGCCACGGACACCGATGTCCATCCACTCGGCGGTAAGGAGTCAAAAATGGAC
TCCAGCAAAATAGCTTCCATGCAACAAATAGTCGAGAACACACTCAGTCAAGAGGGCCGT
CAAAGAGTGTCACAATTGTTGGAAGCTGTAGAGGGTCTCAGTGGTGCGGAGAGATTGTTA
CTTTATCTCCGTCTACCAACCGGTGTACCTCCACACGATCCCCTCAAACAGCCAGTCAAT
CCGCTGGGCTCCAGAGCCGAACTACAGCAGACTGTAACGTGGATACAAACACACTTGGAG
GTTGATCCTGACGTTTCGTTGCCAAAACAAGATGTTTACGATGAATACATAGCTCATTGT
ATGACCAGCAATATGAAACCACTATCGACCGCTGATTTCGGCAAAGTCATGAAGCAGGTG
TATCCTAGTGTGCGCCCGCGCCGGTTGGGAACGCGCGGCAATTCAAGATACTGTTACGCT
GGTCTCCGGAAGAAAGTTAAACTTGAAGTGCCACAGTTGCCAAATTTGGGTGAATCGACC
AAGGAACCAAGTGTGCCTTCAAGAGAAAATGAAAGAATCATTTGTGATTGGGCTGAATCT
AAATTGGGCGTTAAGTTCATGAACATATCGGAGTTATCTCGTCACCTGTTAAGCGCGATG
CGCGCCCCGCCCGGTCCGACCAGCGCCACACCGCCGCCGCAAACGCATGGATCTGATGAA
CCACCGGGACCACAGTTAATGAAACAACAGTTAAAAAGAAAGCTACAGACGCAGGGTACG
GTGGGTCGACCGAAAAAGAACAAGGGGCAAGAAGTCGCCGGGGAATCGCCGCCGTCCACT
TCATACGTAAGCCATCCCACAGTGAAACATGAGAGCGAACTGGTGCCCGAATCGTACGGC
TATCAGCCGGCTTACATGCCCGTTTATGACGTACGGCCGGCCTTTCCCTATGCGGCGCCA
CCTCGTGCTCACCCCCCCCATCCTCTTCCCCCACACCCTCATCCCCCACCACCGCACCCG
CCCGCCATCCCAGTACACGATTACCGGCCCGATCCTTACGTCTTCGAACCGCCATATGCA
CCACGCGACCTTACTCTTCCGGACACGGCCCACAACGTACCGATTAACCTCAGCAGTGAT
GTTTCCCTCGACCTGTCCACCGAGCGCACAGAGTGGCAACGTCGCCGTCCCCCGGACCCT
CCGGCTCCGACCGCCCGTCTTCCGCTGCCTGGGAAGAAGTTAATCTTGGAGACGTATCAG
AGCGAGACTCAAGCTAGCTCCCCTCGCTCGTCACAAACTGACACGCGAGCCGTCCACCAG
CCGCCAGAAGAATTTCCGCGCACGGAATACTTGCCTAAGAAGATGCGTGCCGCTGAGATA
CTGGGCGGTAAGTTGGCGGCACCGAGACAGGTCGCCGCTGCGGACGCGTCGACGTCATCA
TCGACAGGGGCGGAATCGGCACGTTCCGAGGTTGCTTTTTTAAAGGATCCAAAAAACTTA
ACGAACCGGTCCAAAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACAGGAGGCGGCGAGT
CCGACACGGTCGGTGAAGGCTCCGACGCCTAAACACAATCGAACTAAACTGAGAAAGTCG
TCACACATGAGAACGAAGGGGTCGTCTCCGGAGAGGAACGAGCACGACCATTCCGCGGCG
CCCGATACCTGTTGTGGTATTAATGGCATCAATATTATTACGGGAATGATCTGTGGGGAA
AAACATTCTGAGATACTGAACCGTGAACGAGTTATTAGCATCTGTAATATCGATAAACAC
GATTTAGACGATTATCTCAATGAGGGCAATAGCCAGGAACACGAGGAAGAATTAATGCAA
TACTTCCATCATCGCGATGGTGACACAGATATACCAGCAAAATCTAATCAGAACGAAAAT
ACGACTTTTTTAGAAACAAGTCAGGACCCACACGACGAACATAGTCAAGGGAAAAGTGAA
AAAATATCGCAACTGCGAGAACTATTAGCTAAGAATTTGAAAAGTGGGTCCAATACACAG
AATTTATTATTAAATCAAGAAAAACAAACTCCGATTAATAATAATCACGAAACACATGTT
AATAAGAGTTCAATATCGGACGGAGCATTTAGGCCACTAAACAACGTTATGGAAATGATA
AACGGCTCCAATGGCTCAAACGAAAATGAAAATAATGTAAGGAAAAAATGTGATAATATT
CCAAGTGAAAACGGAATTTCCGCTTGTGCCCCAGAGAATTCACACACTCAGGTGATGACA
ACAGCGACTGGTTCTCATCTTTACAATGGTAACAGTCATACGGAACCACAAAGTCCAACT
ACTAGAACACAACAATACGATTTCGTACCTATATCCGATGGATGTCATTCTCCTGGGAAT
TTTAATTCAAAGTCTCCTTTAGGTTTTGGACAACGAGGGCACAGTCCAACTAAAACGAAT
AAACCTATTATAATGGGTGGTTCCTTGCAAACATCTCCTATTTCACATAGCATGGCAGCA
AGTCCTTTTGTCAGTCCAAGAAATACTCCGGTGCCAAGGTCACGCTATTGTTCTAGACCA
ATACCTAAACACAACAATAGAAAGAGACGTACCATTTTGTCACTCGGTGTAAATGAGACT
GGCACTAAACAATTCGCAATACCAAATGATCAGAAATTCCTGCCGAAGTCTTCTTTGGGT
GGGCAGAATATAAAATATTGCCAACCAATGTCAGCACCTCCATCGCCCAACCTCCTACCA
CACTTTAAACAACAAATGATACAAAATTCCGTGATACCAAATGGCACCAGTAATATGTGC
TTTGTGTCAAATACGTTTCGAGAGAATGTTAATGGTGAAATGCCACAACCATTATCAGCA
GATCCGTTGTCCAGTGAAGTGAGTCAATTTTTTCAGGAGCCTGTAACGGGTTATAGAATA
GCTCACGATACATCTTTTAGGTCACAATCGGTACCATTGAAACAGGCAACCATAAACATT
GGCTTGTTGAGCTACAACAATACACCAGTCGGTTCCGTCCCACCTACACCAGTACCGAAT
GAGTTTTGCGATTTTGGTTCTTTAGCTGACACATGTGATATATCTAGGGCAGGACTCAAT
CCTGAGACTCTAGATAAAATATACGACGCTATTGATAGCAGCAATGACGTACTTAACGGT
GGCACGAGTAATAACATATTAAACTCCAGCGACACCCTAACTAACGGTTGTGATCCTTTA
CCCGAACAACAAATTCTGATAGATGAACAGTTAAGTTCACTTATACCTAGCGGGGAAGAA
TTGCTCGATAGGAGCTCCCTTATGGCCAGCGGAGAAGACTTACTCGAAAGGGGTGAACAA
TTCAATGAGTCGTTTCCCAATGACTCGACGGCTTCAGAGAATGTGGAAGAGTTCTTGAAA
CGTACAAACAGCATAGAATTTGATTTATCTGATTTGGTAACAGAAAAAAATAAATACTAC
GCATCACGTTCCGTACCAAGTACGCCATTGCCTTATAAGCGAACGGCTTCGAACTTACAA
ATAGATCCACGGCACGCTAGAGATCTCTTCGCTACCGAAAATTATTCCAGTGTATCGAAC
GGTATATCTTCAAAATCCGTGCCATCTACACCACAATTAGCGGAAGATCGCAGTGTTTTT
AGTTACACCAACAGAGACTTTCTCATTAACGGAAACTCGGTTGACATGTGCTCTAATCAG
ATTAGGCAACCGGTTGAAAATGACCAAGCCTTGACGTCCCCACTTGACGAAATACTAGGT
CCTCTAACGCCAGCCGCAGATCTATTGGCTGACCTCGACAAAATAGATACTGCTCCATAT
GTTGACCTCTAG
Protein sequence:
MDSSTPFQPWSSDDNSKNVKSERELVDDAKLHRENVNHPKHRQTASYNKESVVDPSVVPG
PSSATDTDVHPLGGKESKMDSSKIASMQQIVENTLSQEGRQRVSQLLEAVEGLSGAERLL
LYLRLPTGVPPHDPLKQPVNPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHC
MTSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKVKLEVPQLPNLGEST
KEPSVPSRENERIICDWAESKLGVKFMNISELSRHLLSAMRAPPGPTSATPPPQTHGSDE
PPGPQLMKQQLKRKLQTQGTVGRPKKNKGQEVAGESPPSTSYVSHPTVKHESELVPESYG
YQPAYMPVYDVRPAFPYAAPPRAHPPHPLPPHPHPPPPHPPAIPVHDYRPDPYVFEPPYA
PRDLTLPDTAHNVPINLSSDVSLDLSTERTEWQRRRPPDPPAPTARLPLPGKKLILETYQ
SETQASSPRSSQTDTRAVHQPPEEFPRTEYLPKKMRAAEILGGKLAAPRQVAAADASTSS
STGAESARSEVAFLKDPKNLTNRSKSTAAALAREEQEAASPTRSVKAPTPKHNRTKLRKS
SHMRTKGSSPERNEHDHSAAPDTCCGINGINIITGMICGEKHSEILNRERVISICNIDKH
DLDDYLNEGNSQEHEEELMQYFHHRDGDTDIPAKSNQNENTTFLETSQDPHDEHSQGKSE
KISQLRELLAKNLKSGSNTQNLLLNQEKQTPINNNHETHVNKSSISDGAFRPLNNVMEMI
NGSNGSNENENNVRKKCDNIPSENGISACAPENSHTQVMTTATGSHLYNGNSHTEPQSPT
TRTQQYDFVPISDGCHSPGNFNSKSPLGFGQRGHSPTKTNKPIIMGGSLQTSPISHSMAA
SPFVSPRNTPVPRSRYCSRPIPKHNNRKRRTILSLGVNETGTKQFAIPNDQKFLPKSSLG
GQNIKYCQPMSAPPSPNLLPHFKQQMIQNSVIPNGTSNMCFVSNTFRENVNGEMPQPLSA
DPLSSEVSQFFQEPVTGYRIAHDTSFRSQSVPLKQATINIGLLSYNNTPVGSVPPTPVPN
EFCDFGSLADTCDISRAGLNPETLDKIYDAIDSSNDVLNGGTSNNILNSSDTLTNGCDPL
PEQQILIDEQLSSLIPSGEELLDRSSLMASGEDLLERGEQFNESFPNDSTASENVEEFLK
RTNSIEFDLSDLVTEKNKYYASRSVPSTPLPYKRTASNLQIDPRHARDLFATENYSSVSN
GISSKSVPSTPQLAEDRSVFSYTNRDFLINGNSVDMCSNQIRQPVENDQALTSPLDEILG
PLTPAADLLADLDKIDTAPYVDL