| New model in OGS2.0 | DPOGS200156 |
|---|---|
| Genomic Position | scaffold2452:- 17588-24078 |
| See gene structure | |
| CDS Length | 576 |
| Paired RNAseq reads | 24 |
| Single RNAseq reads | 190 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001619 (3e-55) |
| Best Drosophila hit | CG34362, isoform B (2e-26) |
| Best Human hit | nucleolysin TIAR isoform 2 (1e-16) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005292-PA [Tribolium castaneum] (6e-42) |
| Best NR hit (blastx) | ribonucleoprotein [Aedes aegypti] (5e-31) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12829 |
Nucleotide sequence:
ATGCAGAAGACCTTCCAGCCCTTCGGGACCATCCAGGAGATACGCGTCTTCAAGGATAAG
GGATACGCTTTTATCAGATTCTCAACCAAAGAGAGCGCGACCCATGCTATAGTTGCTGTG
CACAATGCTGATGTTAACGGCGCTCCTGTGAAGTGTTCCTGGGGCAAGGAATCCGGTGAC
CCGAATAACGCACAAGGAGCACAGTTGGGTGGCACTGCCTATAGTCCTTTCGGCGCCTAT
CCAGGAGGTGTTCCACCTTCATATTGGTATAACACATACCCGCAGCAACTGGGAGGTTTC
CTGCAAGGAGTCCAGGGAGTGCAAGGATACTCCTATGCCGGACAATTCGCGGGCTATCAG
CAACAATACATGGGCATGGGCGGCGTACAATTGCCATGGGCGCTGGGCGGAGGCGTGGGC
GGTGTGGGCGGAGTGGGCGGCGTCGGTGGTGTCGGTGGCGTCGGTGGTGTTGCTGCAATG
TCTCAGCCGCCTCAAGTGCTGCACTATCCCGTACAGCACTTTCAAGTCCAGCCCATCGGT
GAAGACGAGTGGCTGGCGCCGAGCCTGCTGGTGTGA
Protein sequence:
MQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNADVNGAPVKCSWGKESGD
PNNAQGAQLGGTAYSPFGAYPGGVPPSYWYNTYPQQLGGFLQGVQGVQGYSYAGQFAGYQ
QQYMGMGGVQLPWALGGGVGGVGGVGGVGGVGGVGGVAAMSQPPQVLHYPVQHFQVQPIG
EDEWLAPSLLV