| New model in OGS2.0 | DPOGS213386 |
|---|---|
| Genomic Position | scaffold1140:+ 40880-44579 |
| See gene structure | |
| CDS Length | 1344 |
| Paired RNAseq reads | 19866 |
| Single RNAseq reads | 112114 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009132 (0.0) |
| Best Drosophila hit | beta-Tubulin at 56D, isoform B (0.0) |
| Best Human hit | tubulin beta-2C chain (0.0) |
| Best NR hit (blastp) | beta-tubulin [Bombyx mori] (0.0) |
| Best NR hit (blastx) | beta-tubulin [Mythimna separata] (0.0) |
| GeneOntology terms | GO:0005200 structural constituent of cytoskeleton GO:0007017 microtubule-based process GO:0045298 tubulin complex GO:0005525 GTP binding GO:0016203 muscle attachment GO:0005874 microtubule GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0007018 microtubule-based movement GO:0003924 GTPase activity |
| InterPro families | IPR003008 Tubulin/FtsZ, GTPase domain IPR008280 Tubulin/FtsZ, C-terminal IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR000217 Tubulin IPR017975 Tubulin, conserved site IPR013838 Beta tubulin, autoregulation binding site IPR023123 Tubulin, C-terminal IPR002453 Beta tubulin |
| Orthology group | MCL10040 |
Nucleotide sequence:
ATGAGGGAAATCGTTCATATCCAGGCCGGCCAATGCGGAAACCAGATCGGTGCTAAGTTC
TGGGAGATCATCTCCGACGAGCACGGCATCGACCCCACTGGTGCCTACCATGGAGACTCC
GACTTGCAGCTGGAGCGCATCAATGTGTACTACAATGAGGCCTCCGGTGGCAAGTACGTC
CCCCGCGCCATCCTCGTGGACTTGGAGCCCGGCACCATGGACTCTGTCCGCTCTGGACCT
TTCGGACAGATCTTCCGCCCTGACAACTTCGTCTTCGGTCAATCCGGAGCCGGCAACAAC
TGGGCCAAGGGTCACTACACAGAGGGAGCTGAACTAGTCGATTCAGTTTTAGACGTCGTG
CGTAAAGAGGCAGAGTCGTGCGACTGTCTTCAAGGTTTCCAACTGACACACTCACTGGGA
GGCGGCACCGGGTCCGGCATGGGCACGTTACTCATCTCCAAGATCAGAGAGGAATATCCC
GACAGAATCATGAACACATACTCAGTAGTCCCCTCGCCCAAAGTATCAGACACCGTCGTA
GAACCTTACAACGCGGTGCTCTCCATCCATCAGCTAGTCGAAAACACAGACGAAACATAT
TGCATAGATAACGAGGCCCTATACGATATCTGCTACAGAACACTCAAAGTGCCCAACCCG
ACTTACGGCGACCTCAACCATCTCGTGTCGCTCACCATGTCCGGTGTCACCACCTGCCTC
AGGTTCCCCGGTCAGTTAAACGCCGACCTCCGCAAGTTGGCCGTCAACATGGTTCCCTTC
CCCCGTCTCCACTTCTTCATGCCCGGATTCGCACCCCTGACATCTCGCGGCAGCCAGCAG
TACCGCGCCCTGACCGTTCCCGAGCTCACTCAGCAGATGTTCGACGCCAAGAACATGATG
GCAGCCTGCGACCCTCGCCACGGCCGCTACCTCACCGTGGCCGCCATCTTCCGTGGTCGC
ATGTCCATGAAGGAGGTGGACGAGCAGATGCTCAACATCCAGAACAAGAACTCGTCGTAC
TTCGTGGAATGGATCCCCAACAACGTGAAGACCGCCGTGTGCGACATCCCTCCCCGCGGT
CTCAAGATGGCCGCCACCTTCATCGGCAACTCCACCGCCATCCAAGAGCTGTTCAAGCGC
ATCTCGGAGCAGTTCACCGCCATGTTCAGACGCAAGGCTTTCCTCCACTGGTACACCGGC
GAGGGAATGGACGAGATGGAGTTCACGGAGGCGGAGAGCAACATGAACGACCTGGTGTCC
GAGTACCAGCAGTACCAGGAAGCCACCGCCGACGAGGACGCGGAGTTCGACGAGGAACAG
GAGCAGGAGATCGAGGAGAACTAG
Protein sequence:
MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV
EPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATADEDAEFDEEQEQEIEEN