| New model in OGS2.0 | DPOGS201759 |
|---|---|
| Genomic Position | scaffold115:+ 15839-18991 |
| See gene structure | |
| CDS Length | 1878 |
| Paired RNAseq reads | 470 |
| Single RNAseq reads | 1111 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002654 (0.0) |
| Best Drosophila hit | dead box protein 73D (9e-98) |
| Best Human hit | ATP-dependent RNA helicase DDX51 (2e-90) |
| Best NR hit (blastp) | PREDICTED: similar to ATP-dependent RNA helicase DDX51 [Tribolium castaneum] (2e-123) |
| Best NR hit (blastx) | PREDICTED: similar to ATP-dependent RNA helicase DDX51 [Tribolium castaneum] (9e-125) |
| GeneOntology terms | GO:0004004 ATP-dependent RNA helicase activity GO:0003676 nucleic acid binding GO:0008026 ATP-dependent helicase activity GO:0005524 ATP binding |
| InterPro families | IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR001650 Helicase, C-terminal IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR014001 DEAD-like helicase |
| Orthology group | MCL15493 |
Nucleotide sequence:
ATGGATTTGTTTGTAATTAATAGGTATAAAGAAAATAATGAAAAAGATGACTTGATTAAT
CAGGAAACATTACACCTCCAAAGATTAAAACAAAAGATTGAAGAAAGAAAGAAAACACAC
CGAAAGTCTCAAATAAATAATGATGTTATAGTTATTAAAAATGATGAACTTTTAAGAGAT
TCTGGTCTTCAAGATATTCCAGCAGAAAATAAAATATCTGAGCCTGAACTAAAGTCAGCA
GAGGCGAAATCAAATAATGAAATACAACCAAAAAGAAAAAAGAAATCAGAACAAGTTTCT
ACTGAATTTAAAGTATTGGGCACTACAGACTTTGAAAAAAAATCTAAAGTTGAAAGAGTA
CTTCCATATTGGCTGTCACATGCTTACAGTGTGTCAAAAAACCTTCAAACATTAACATGC
AAAGTGGAGAATCAAAGTTGGCTACACAATACTCTTTTGACAACCCTGACAAGTGAAGGT
GTAACACACTTCTTTCCAGTTCAAGAGCAAGTGATTCCATTCATTATTCAACAACACCAG
CATCCTGAACTGTTACGACCACATGATATATGCGTCTCTGCTCCTACTGGCAGTGGTAAA
ACCCTGTCGTTTGTTTTGCCAATTATTCAGGTTTTAATGAATGAAATTGGTCACCACATA
AGAGCATTAGTTGTATTACCTGTACAGGAACTTGCAATACAAGTTGCTCAAGTTTTTAAA
AAGTACTGTACAAATACAGGACTAAGAGTTCAGTTGTTGAGTGGGTCTACGCCATTACAA
AAAGAACAGCAACAAATTATGAGATTCACGGAAACCTTGAAATGGATTTGTGAAATTGAC
ATCATAGTTTGCACAGCCGGCAGATTAGTGGAGCATTTGCAAAATACTGAAGGTTTTTCA
CTGAAAAATTTGAAGTTTCTCGTTATTGATGAAGCTGATAGGATTATGGATAATATTCAG
AATGATTGGCTTTACCACATGGAAAAGCATATAAAAATGGAGAACCATACATCAAATAAG
GTCCCACATCTAAATTGGGTCGGTTTAAACTCACAGAGATCATCGGTTCATAAACTTTTG
TTCTCTGCAACATTGTCTCCGGACCCCGAGTTGTTAGAGGAGTGGGGACTCTTCCAACCT
AAACTATTTTCAGCTATTCCTATCCAAGACCACCCAGATAGCAATGTATCGAAAAAATAC
ACAACACCAGATGAATTACAGGAACAATATGTTGTTTGCAGCGCGGAAGAAAAACCTCTA
ATATTTTATTACTTCTTTGCTGAACTCAAATGGGACAAGACACTTTGTTTTACAAATTCA
TCCCAATCAGCTCATAGATTGACAGTCCTCCTCAATATATGGAGTAAAGGAAACCTAAAG
GTGGCTGAACTGTCAGCTGCTTTAGACAGAACTAGTAGAGAACTGGTTCTAAGAAAGTTT
AAACAGTCTGAAATTAATGTTATAATATGCACAGATGCGCTCGCCAGGGGTATAGATATA
CCTGATTGTAACTATGTCATATCATACGACCCTCCAAGGAATATCAAGACATATGTTCAT
CGAGTTGGCCGAACGGGACGTGCCGGGAGAATTGGAAACGCTGTTACAATAATTGTACAT
AATCAAGTGCAAATGTTCAAGGACATACTTCAGTCTGGCGGAAAATCTGATATTCCTCAA
TTAGAGATGCAGAATGATATTCTACAAGACTTAATGCCGGGTTATCAAAATGCAATCCGT
GAAACAAAGCAATCGATTGACAATGAAATTCATGATAAAGTTAAAAAATCTAAGGAGTTG
AAGAGAATGTCAAAATCGAAGCCTCGGAAGAGAAAACATAATGAAAATAAGTCACTGAAT
GTACCAATGGAACAATAA
Protein sequence:
MDLFVINRYKENNEKDDLINQETLHLQRLKQKIEERKKTHRKSQINNDVIVIKNDELLRD
SGLQDIPAENKISEPELKSAEAKSNNEIQPKRKKKSEQVSTEFKVLGTTDFEKKSKVERV
LPYWLSHAYSVSKNLQTLTCKVENQSWLHNTLLTTLTSEGVTHFFPVQEQVIPFIIQQHQ
HPELLRPHDICVSAPTGSGKTLSFVLPIIQVLMNEIGHHIRALVVLPVQELAIQVAQVFK
KYCTNTGLRVQLLSGSTPLQKEQQQIMRFTETLKWICEIDIIVCTAGRLVEHLQNTEGFS
LKNLKFLVIDEADRIMDNIQNDWLYHMEKHIKMENHTSNKVPHLNWVGLNSQRSSVHKLL
FSATLSPDPELLEEWGLFQPKLFSAIPIQDHPDSNVSKKYTTPDELQEQYVVCSAEEKPL
IFYYFFAELKWDKTLCFTNSSQSAHRLTVLLNIWSKGNLKVAELSAALDRTSRELVLRKF
KQSEINVIICTDALARGIDIPDCNYVISYDPPRNIKTYVHRVGRTGRAGRIGNAVTIIVH
NQVQMFKDILQSGGKSDIPQLEMQNDILQDLMPGYQNAIRETKQSIDNEIHDKVKKSKEL
KRMSKSKPRKRKHNENKSLNVPMEQ