| New model in OGS2.0 | DPOGS209656 |
|---|---|
| Genomic Position | scaffold4139:- 540-2256 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 200 |
| Single RNAseq reads | 791 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008126 (4e-25) |
| Best Drosophila hit | cuticular protein 56F (1e-22) |
| Best Human hit | ND |
| Best NR hit (blastp) | putative cuticle protein CPR151 [Bombyx mori] (8e-41) |
| Best NR hit (blastx) | putative cuticle protein CPR151 [Bombyx mori] (2e-45) |
| GeneOntology terms | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL10599 |
Nucleotide sequence:
ATGTCATATTGTTTTCAGTGTTTCATAGTGTGCTCGTTACTCGTGGTGTCGTGTTTGGCG
GAGCCACCAGTTAATAACAGGTATCTTCCTCCACAAGCGAGGAACGCGTCTCCCTCTCAG
AGTTATGGTGTTCCCGGATTCAGTCAGAGACAGACTGAAGCTGTCTTCAGAGGACGTCCT
TCATCTGCCTACGGACCACCTGCAAGTATCCGGAAACCAAACTCTCAATACGGACTACCC
AAAACTCCTTCCTCTCAGTATGTAGCACCGAACAACCAATATCAAGGACCAAAACAAGCA
CCCACCGGCCAATATTTACCACCAACCAGCCAATACCAAGCTTCTGTGAATCAATATCCA
GCTCCGAGCCAATACCAAGCACCAAAGGCACAATACTTGCCACCTGTAAACCAATACCAA
GCACCTTCCACTCAATACGGTGTACCAAATCAGGCTGGACCCAATGGTCCCTCTCAAGAA
TATGGAGCTCCTGGGTTTGACCGAAGTGGTGTTGACAACAAATATGATAACCAGCAAAGC
AGACAGTACCTCCCTCCCAGTGCTCGAGGATATGATGATGGAAGCAGAGGAGAGCCCGCA
AACTACGACTTCGAATACATGGTCCAGGACGCTCCCTCCGGCAACGACTTCGGACACCGA
GAGTCACGACGAGGGGACCGCGCTGAAGGAGTGTTCTATGTCGTCTTACCTGATGGAAGG
AAACAGACTGTTGAATATGAAGCCGACCAGGACGGTTTCAAGCCCAGGATCTCATACGAA
GACGTTGGCGCCGGATCAGGCTACGACAGTAACAGACAAGCGGATTACAACAACGATAAT
ACCAACGGACCTTATTAG
Protein sequence:
MSYCFQCFIVCSLLVVSCLAEPPVNNRYLPPQARNASPSQSYGVPGFSQRQTEAVFRGRP
SSAYGPPASIRKPNSQYGLPKTPSSQYVAPNNQYQGPKQAPTGQYLPPTSQYQASVNQYP
APSQYQAPKAQYLPPVNQYQAPSTQYGVPNQAGPNGPSQEYGAPGFDRSGVDNKYDNQQS
RQYLPPSARGYDDGSRGEPANYDFEYMVQDAPSGNDFGHRESRRGDRAEGVFYVVLPDGR
KQTVEYEADQDGFKPRISYEDVGAGSGYDSNRQADYNNDNTNGPY