| New model in OGS2.0 | DPOGS201553 |
|---|---|
| Genomic Position | scaffold4612:- 11905-13913 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 703 |
| Single RNAseq reads | 1725 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006028 (3e-60) |
| Best Drosophila hit | mediator complex subunit 15 (2e-45) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 15 isoform a (3e-36) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013685 [Tribolium castaneum] (2e-66) |
| Best NR hit (blastx) | PREDICTED: similar to Mediator complex subunit 15 CG4184-PA [Apis mellifera] (7e-64) |
| GeneOntology terms | GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex GO:0006357 regulation of transcription from RNA polymerase II promoter |
| InterPro families | IPR019087 Mediator complex, subunit Med15, metazoa |
| Orthology group | MCL11292 |
Nucleotide sequence:
ATGGTCCTCAGGATGGTCAGCGAGGGAGAGAATGTGGAGAAGCTAACTAAGATGAAGAAT
CTATTGGACATATTATCAAACCCTAATAAACGTATGCCGTTGGAGACATTGATCAAGTGT
GAGGTGGTGTTGGAGAAGCTGGACTTCAAACGGAGTGAGGGTGTCGGATTAGGGCTGCCG
TCTGCCGGAAAGGAGCAGATCTTCAACCCCCTACTGGAGGTAGTGAACAACTGTCTCCAG
TCTCCGCTAGCCAACCATACCCTCAAGAGAACATTCGGTTCAACTCTCGATGCCCTCAAT
GGACCGGAGATCAAGAATCTTCCACCGCCGCCTCCGAAAATAGCGAAAGTGGAGGAACCC
ACCATGGAAATACCAGACGTTCTGCAAGGAGAGATCGCGAGGTTGGACTCCAGGTTTAAG
GTGTCCTTGGAGACGATGCAGCTGTCAGGTGGTGAGGGCGCCATCTCTTTGATCGCTCAG
TTGGACGACGTGCGCCTGCCGTGTGTGCCGGCTGTCCACGTGACCGTGCCCCGGGACTAT
CCGGCCGCCTCGCCCGCCCGCCTCCGACCGAAGACCACCAAGAGGAACAACGAGGACTGC
TTCCTGGCCAGGGTCGAGAAAGCTATGGACGCGAGATGTGCCAGATTACCAAAAAGTTGT
TCGGTGGGCCAGTTACTGGACGCGTGGGAGATGAGCGTGAGACAAGCCTGTGCTCCGAAC
CCCCAGGCTTACAACGCTGTACCAGCCCTAGGACTGTAA
Protein sequence:
MVLRMVSEGENVEKLTKMKNLLDILSNPNKRMPLETLIKCEVVLEKLDFKRSEGVGLGLP
SAGKEQIFNPLLEVVNNCLQSPLANHTLKRTFGSTLDALNGPEIKNLPPPPPKIAKVEEP
TMEIPDVLQGEIARLDSRFKVSLETMQLSGGEGAISLIAQLDDVRLPCVPAVHVTVPRDY
PAASPARLRPKTTKRNNEDCFLARVEKAMDARCARLPKSCSVGQLLDAWEMSVRQACAPN
PQAYNAVPALGL