New model in OGS2.0 | DPOGS214540  |
---|---|
Genomic Position | scaffold4189:- 8005-11196 |
See gene structure | |
CDS Length | 792 |
Paired RNAseq reads   | 264 |
Single RNAseq reads   | 1108 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011146 (4e-47) |
Best Drosophila hit   | CG11802 (6e-26) |
Best Human hit | loss of heterozygosity 12 chromosomal region 1 protein (2e-09) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP009657-PA [Tribolium castaneum] (3e-54) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP009657-PA [Tribolium castaneum] (5e-45) |
GeneOntology terms    | GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
InterPro families   | IPR018780 Tumour suppressor protein, LOH1CR12 |
Orthology group | MCL12800 |
Nucleotide sequence:
ATGGGTTCTGAGCAATCCTTGCCTCCCAAGAAACAGTCCCAGAGACCACCGGTCAGGCGT
GGACACACTATAGCTACATCAAATCTTCCCGATGGCAGAAGACAGGATTCTACAAGTGGT
AATAATTCCCCCGGAGCCAGCATGTGTTCGGATTCCGAACTGCCGTACATATCATACACG
GTTGATCGACCTATCGGTGATTCACCGAAAACTAATAAGAGTCAGAGAACTCAAGACAAG
AAATCCTTGTTACAACGGAGGCAACTGAGCTTGCAAGCAAGGAAAAACAAACGGACAAGG
GAAATCGTTGTTGTTAAGCCAGCGACGGACACACAGCTGGACGAGGACATTAGAAGGTTA
CAGGAAATCCCAACGTTCCTGCCAATAATGCGAGGAACGTTAGGTCTACCGGGGGCTAAG
GATCCGGAGGTCTTGGAAGGTCTGTACATAGGTTTAGACTCCCGTCCCTGGATAAGGATG
TCGTCAAGAGTTCAAGCCCACCTCGCAGCTTGCGCACAGCCTCTGGCCGCTGATGAGATA
AATCTCGCTAGTAAGATCAAAGAGGCGGATACGGAAATAACACGCTTGTATACAGCGGCT
GTTGAGAAACAGAGAAGTAACGCTAGACACGCGGAGCGGCTGTCCCGTGTCAGGGAACTG
CATCATCAGCTCTCGCGTTGTAACTCACTGTTGAACCAGACTCTTCAGGACATAGAGGAA
TTAAACCAATTGTTACCAGAAGATAAGAGACTGCAGCCGTTCGTGTGGAACGAGAACAAA
ACGAGCTCGTGA
Protein sequence:
MGSEQSLPPKKQSQRPPVRRGHTIATSNLPDGRRQDSTSGNNSPGASMCSDSELPYISYT
VDRPIGDSPKTNKSQRTQDKKSLLQRRQLSLQARKNKRTREIVVVKPATDTQLDEDIRRL
QEIPTFLPIMRGTLGLPGAKDPEVLEGLYIGLDSRPWIRMSSRVQAHLAACAQPLAADEI
NLASKIKEADTEITRLYTAAVEKQRSNARHAERLSRVRELHHQLSRCNSLLNQTLQDIEE
LNQLLPEDKRLQPFVWNENKTSS