| New model in OGS2.0 | DPOGS207908 |
|---|---|
| Genomic Position | scaffold7488:+ 6342-8076 |
| See gene structure | |
| CDS Length | 510 |
| Paired RNAseq reads | 79 |
| Single RNAseq reads | 418 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012196 (3e-25) |
| Best Drosophila hit | adenosine deaminase acting on RNA, isoform A (3e-16) |
| Best Human hit | double-stranded RNA-specific editase 1 isoform 2 (3e-17) |
| Best NR hit (blastp) | adenosine deaminase [Bombyx mori] (8e-47) |
| Best NR hit (blastx) | adenosine deaminase [Bombyx mori] (2e-46) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003725 double-stranded RNA binding GO:0003726 double-stranded RNA adenosine deaminase activity GO:0004000 adenosine deaminase activity GO:0005622 intracellular GO:0005634 nucleus GO:0005654 nucleoplasm GO:0005730 nucleolus GO:0006396 RNA processing GO:0006397 mRNA processing GO:0016556 mRNA modification GO:0016787 hydrolase activity GO:0046872 metal ion binding |
| InterPro families | IPR002466 Adenosine deaminase/editase |
| Orthology group | MCL40725 |
Nucleotide sequence:
ATGATTGCCATTTGTAGTGCAATCTGCGGTCGTATAGAGGCCTACATATCATCGCTGCCT
CCGCCGTATCAGCTCCAACGTCCGTTGCTTGCTCGTGCTGCGAGTACAGAAGCCCGGACG
CCAGCCCGCGCTCCATCATTCAGCGTCTGCTGGGCATCAACCTCCCCCGAGCCAGAAGTT
ATAAACGCTACAACAGGGAAACTCGAATCTGGCACACCATCACTGCTTTGTAAACAGACC
ATGTTCGCGAGGTGGCAGCATTTAGTGCGTCGTTTACCTCTGTTACCTCAGGACGAGACC
GGACCCGAGTTACCCCCGCTACCAGAAAACTTGGACACCTTGCTTTACAACGAGGCCAAG
CAGCTATGTACGACCTATCAGCTGGCGAAGTCTGAGCTGACGGGCGCGTTCAGTCGCGCA
CAACTCGGTCGTTGGATAAAGAAGCCGTTGGAGCAAGATCAGTTTGTCTGCGAGCTACTG
GCCGCTGAGCCCGACGTGTTGTTTCGCTAG
Protein sequence:
MIAICSAICGRIEAYISSLPPPYQLQRPLLARAASTEARTPARAPSFSVCWASTSPEPEV
INATTGKLESGTPSLLCKQTMFARWQHLVRRLPLLPQDETGPELPPLPENLDTLLYNEAK
QLCTTYQLAKSELTGAFSRAQLGRWIKKPLEQDQFVCELLAAEPDVLFR